Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1240 |
Symbol | rnc |
ID | 4240751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1420157 |
End bp | 1420840 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104813 |
Product | ribonuclease III |
Protein accession | YP_719452 |
Protein GI | 113461383 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAA TTATGCAACT GGAAAAATTA CAAAAAAAAT TAGGTCACCA ATTTACTAAT CTTGATTATC TTAAACAAGC ATTAACGCAT CGAAGTGCTG CTGCATTTAA TAATGAACGT TTGGAATTTC TAGGTGATTC CATTCTAAAT TTTGCTATTG GCAAAGCACT TTACGAAAAA TTTCCTAAGT CTAATGAAGG TGAATTAAGC CGGATGCGTG CAACGTTGGT TAAAGAACAA ACTTTAGCTG TTGTGGCTCG CCAAGTTGAA TTGGGTGATT ACTTAAAACT AGGTGCCGGA GAGTTAAAGA GCGGTGGATT TCGCCGAGAA TCTATTCTAT CTGATTGTGT TGAAGCGTTA ATTGCAGCGA TTTATTTAGA TGCAGGAATC GATGTTGCTT TAGCTCGAGT TTATCAGTGG TATCAGGAAT TACTTGAACA AATAAAACCA GGAGAGGCAC AAAAAGATCC CAAAACACGC CTGCAAGAGT TTTTGCAAGG GCATCGCTTA AAACTTCCTG AATATGAAGT GATAGAAATT AAGGGAGATG CTCACAATCA GTCTTTTAGA GTGAGCTGTA AAGTGGAAAC ACTTACTGAC GTCGTTTTTG GGCAAGGGAC TAGTCGCCGT AAAGCGGAAC AACATGCTGC TCAACAAGCT ATTGAAAAAC TGAAAATTAA ATAA
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Protein sequence | MKKIMQLEKL QKKLGHQFTN LDYLKQALTH RSAAAFNNER LEFLGDSILN FAIGKALYEK FPKSNEGELS RMRATLVKEQ TLAVVARQVE LGDYLKLGAG ELKSGGFRRE SILSDCVEAL IAAIYLDAGI DVALARVYQW YQELLEQIKP GEAQKDPKTR LQEFLQGHRL KLPEYEVIEI KGDAHNQSFR VSCKVETLTD VVFGQGTSRR KAEQHAAQQA IEKLKIK
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