| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1176 |
|---|
| Symbol | |
|---|
| ID | 4240677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1326447 |
|---|
| End bp | 1327172 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104739 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_719388 |
|---|
| Protein GI | 113461319 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATAC TGCATGCAGA ACATCTCGCT AAAAGCTATA AAAACCGTCA AGTGGTTTCT
GATGTAAGTT TAACAGTGAA CTCTAATGAA ATTGTAGGTT TACTGGGACC GAATGGTGCG
GGAAAAACCA CAACATTTTA TATGATCGTC GGTTTAATAC GCCATGATCA AGGAAAAATT
CACATTGATA ACGAAGATAT CAGTTTGTTG CCTATGCACA AACGAGCACA GCGAGGAATG
GGTTATCTGC CACAAGAAGC CTCTATTTTC CGACGATTGA GTGTTTATGA AAATTTAATG
GCAGTCTTGG AAATCCGTAA AGATTTAAAT ATGCAACAAC GTCGTACTCG AGCTGATGAA
CTGATTGAAG AATTTAATAT CGGTCATATC TATGATAATT TGGGACAATC TTTATCGGGC
GGTGAACGTC GTCGTGTAGA AATTGCACGT GCCTTAGCTG CAAACCCTAA ATTTATTTTA
TTGGATGAAC CTTTTGCCGG TGTTGATCCC ATTTCCGTAA TTGATATAAA GAAAATTATC
CAAGATTTAC GCAATCGTGG ATTGGGTGTG TTAATCACTG ATCATAATGT GCGAGAAACA
CTGGACGTTT GTGAACGAGC TTACATTGTC AGCTCAGGAA AAATGATAGC AACGGGTACA
CCTGCTGAAG TCATGAATAA CGAACAAGTT AAACAAGTTT ATCTTGGTAA AGAATTTAAA
TTGTAA
|
|---|
| Protein sequence | MSILHAEHLA KSYKNRQVVS DVSLTVNSNE IVGLLGPNGA GKTTTFYMIV GLIRHDQGKI
HIDNEDISLL PMHKRAQRGM GYLPQEASIF RRLSVYENLM AVLEIRKDLN MQQRRTRADE
LIEEFNIGHI YDNLGQSLSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKKII
QDLRNRGLGV LITDHNVRET LDVCERAYIV SSGKMIATGT PAEVMNNEQV KQVYLGKEFK
L
|
|---|
| |