Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1172 |
Symbol | |
ID | 4240673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1323562 |
End bp | 1324347 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638104735 |
Product | ABC transporter permease |
Protein accession | YP_719384 |
Protein GI | 113461315 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCGAG TTATTTCATC TTTAGGTAGA TGGGGAATGG ATTTTTGTCG TTCTTTAGGG CGAGCCGGTT TTATGCTTTT TGGTGCATTG GTTGGGAAAC AACAGATGAG GAAGCATTTC CCCTTACTTA TTAAACAACT TTATGTATTA GGTGTACAAT CTTTGTTAAT CATCATGTTA TCGGGTTTAT TTATTGGCAT GGTGTTGGGG TTGCAAGGGT ATGTGGTGTT AGTGGATTTT TCCGCAGAAA CAAGTCTTGG ACAATTAGTT GCATTATCAT TGTTACGAGA ATTAGGCCCT GTTGTAACCG CACTTTTATT CGCTGGTCGA GCCGGTTCAG CTCTTACGGC TGAAATAGGT TTAATGAAAG CAACAGAGCA GTTATCCAGC TTAGAAATGA TGGCAGTTGA TCCTTTGCGT CGAGTTATTT CACCTCGTTT TTGGGCAGGT GTGATTTCTA TGCCCATTCT TGCCGTTATT TTTACCGCAA TTGGTATTTG GGGCGGTTCT TTAATCGGTG TGGATTGGAA AGGTGTGGAT GCTGGGAGTT TTTGGTCGGT GATGCAAAAC TCGGTCAGTT GGAGCTATGA TTTATTAAAT GGTTTTATTA AGAGTTTATG TTTTGCTATT GCTGTTGTTT GGATTGCATT ATTCAACGGC TATGATTGTA TTCCGACGTC GGAGGGAATT AGTAAAGCGA CAACGAAAAC GGTGGTGCAT GCTTCTCTTG TTGTTTTAGG ATTGGATTTT GTACTAACAG CGTTGATGTT TGGTGCAGGT TCATAA
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Protein sequence | MIRVISSLGR WGMDFCRSLG RAGFMLFGAL VGKQQMRKHF PLLIKQLYVL GVQSLLIIML SGLFIGMVLG LQGYVVLVDF SAETSLGQLV ALSLLRELGP VVTALLFAGR AGSALTAEIG LMKATEQLSS LEMMAVDPLR RVISPRFWAG VISMPILAVI FTAIGIWGGS LIGVDWKGVD AGSFWSVMQN SVSWSYDLLN GFIKSLCFAI AVVWIALFNG YDCIPTSEGI SKATTKTVVH ASLVVLGLDF VLTALMFGAG S
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