| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1158 |
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| Symbol | potB |
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| ID | 4240659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1308543 |
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| End bp | 1309403 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638104721 |
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| Product | spermidine/putrescine ABC transporter membrane protein |
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| Protein accession | YP_719370 |
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| Protein GI | 113461301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000395482 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATGA ACAGTAATAA ATTTCAAAAC TTAACTGTTA GTGTCATTTT CGGCTGGTTA
CTCTTCTTTG TTTTAGTACC AAACCTGCTA GTCTTAACAG TTAGTTTTTT ATCAAAAGAT
AGCAGTAATT TTTATGCTTT GCCTTTTAGC TTGGAAAGTT ACGCAAACTT AGTTGACTCA
CATTACGCCA AAGTAATGTG GAATTCACTC CGTATGTCTG CGATTGCAAC TGTTATCTGT
TTACTTGTAG GTTATCCTTT TGCATTTTTC ATTGCCAAAA TAAAACCCTC ATACCGTCCA
TTTTTGCTAT TCCTCGTTGT TTTACCTTTT TGGACGAATT CGTTAATTCG TATTTACGGA
ATGAAAATCT TTCTTGGTAT GAAAGGTATT TTAAACAATA CCCTAATTGC AATCGGTATT
ATTGACACGC CAATTCGTAT CTTGAATACC GAAACTGCGG TAATCATTGG ATTAGTTTAC
ATCTTACTGC CTTTTATGAT TTTACCGCTT TACGCTGCCA TTGAAAAACT GGATCTTCGT
TTATTAGAAG CGGCAAAAGA TTTGGGAGCG AATTCATTCC AACGTTTTAT TAGAATCATT
ATTCCATTAA CAATGCCGGG AATTATCGCA GGTTGTTTGT TAGTTCTATT ACCCGCAATG
GGAATGTTCT ATGTGTCAGA TTTGCTTGGC GGTGCGAAAG CAGCCCTAGT AGGTAATGAA
ATTTATGTCC AATTCTTAAA AATAAGAAAC TGGCCTATGG GTTCAGCAAT TAGTATAGCA
CTTACTCTAC TAATGGCTTT ATTAATTTTT ATTTACTATA AAACAAGTAA ATTATTAAAT
AAAAAAATGG AGTTGGAATA A
|
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| Protein sequence | MKMNSNKFQN LTVSVIFGWL LFFVLVPNLL VLTVSFLSKD SSNFYALPFS LESYANLVDS
HYAKVMWNSL RMSAIATVIC LLVGYPFAFF IAKIKPSYRP FLLFLVVLPF WTNSLIRIYG
MKIFLGMKGI LNNTLIAIGI IDTPIRILNT ETAVIIGLVY ILLPFMILPL YAAIEKLDLR
LLEAAKDLGA NSFQRFIRII IPLTMPGIIA GCLLVLLPAM GMFYVSDLLG GAKAALVGNE
IYVQFLKIRN WPMGSAISIA LTLLMALLIF IYYKTSKLLN KKMELE
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