Gene HS_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1155 
Symbol 
ID4240656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1304541 
End bp1305965 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content40% 
IMG OID638104718 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_719367 
Protein GI113461298 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA AATTACATAT TAAAACTTGG GGCTGCCAAA TGAACGAATA TGATAGTTCG 
AAAATGGCAG ATTTGCTTTT AAATACCCAT GGTTTAGAAC TGACTGATGT ACCGGAAGAA
GCAGACGTAT TGCTATTAAA TACCTGTTCT ATTCGTGAAA AAGCACAAGA AAAAGTGTTT
CATCAGTTAG GTCGTTGGAA AGAATTAAAG AAACAAAATC CGAGCTTGGT AATTGGTGTG
GGCGGTTGTG TGGCTTCACA GGAAGGGGAG CATATTCGTT CACGTGCACC TTATGTTGAT
ATTGTATTTG GACCACAAAC ATTGCATCGC CTACCTGAAA TGATTAATCA AATTCGTGGT
GGAAAAAGTG CGGTGGTTGA TGTAAGTTTT CCTGAAATTG AGAAATTTGA TCGCCTACCG
GAACCGAGAG CGGAAGGACC GACAGCGTTC GTTTCTATCA TGGAGGGCTG TAATAAATAT
TGTTCATTCT GTGTAGTGCC TTATACTCGA GGTGAAGAGG TAAGTCGTCC CGTAGATGAT
GTCTTATTCG AAATTGCACA ACTTGCAGAG CAAGGGGTGC GTGAAGTCAA TTTATTGGGG
CAGAATGTGA ACGCTTATCG TGGACCAACA CATGATGGCG GTATTTGTTC ATTTGCTGAG
TTATTACGTT TAGTCGCTTC TATTGATGGA ATTGATCGAT TACGTTTTAC CACCAGCCAC
CCAATTGAAT TTACTGATGA TATTATTGAT GTATATGCGG ATACGCCTGA ATTGGTGAGT
TTCTTACATT TACCCGTGCA AAGCGGTTCA GATCGTGTAT TGAATTTAAT GAAGCGAAAT
CATACCGCAC TTGAATATAA ATCAATTATT CGCAAATTAA AAAAAGTGCG GCCGAATATT
CAGATTAGTT CAGATTTTAT TGTTGGGTTT CCGGGGGAAA CGGATCAGGA TTTTGAAGAC
ACGATGAATT TAATTGCTCA AGTGAATTTT GATATGAGCT TTAGCTTTAT TTATTCTGCT
CGTCCCGGAA CGCCGGCAGC AGATATGCCT GATGATGTAA CGGAAGAAGA GAAAAAACAA
CGCCTATATT TGCTACAACA ACGCATTAAC AATCAAGCAG CACAATTTAG TCGAGCAATG
TTAGGGACAG AGCAACGTGT ATTGGTTGAA GGTCCATCGA AAAAAGATAT TATGGAATTA
ACAGGTCGTA CGGAAACAAA TCGTATAGTT AATTTTGCAG GAACGCCTAA CATGATCGGT
AAGTTTGTAG ATATTAAAAT TACTGATGTC TATACCAATT CTCTACGAGG TGAGGTAGTT
CGTACCGAAG ATGAAATGGG GTTACGTATT GTTCAATCTC CGCAAGTCGT TATTAACCGC
ACTCGTAAAG AAGACGAGCT AGGCGTCGGA CATTATCAAG GGTAA
 
Protein sequence
MTQKLHIKTW GCQMNEYDSS KMADLLLNTH GLELTDVPEE ADVLLLNTCS IREKAQEKVF 
HQLGRWKELK KQNPSLVIGV GGCVASQEGE HIRSRAPYVD IVFGPQTLHR LPEMINQIRG
GKSAVVDVSF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CSFCVVPYTR GEEVSRPVDD
VLFEIAQLAE QGVREVNLLG QNVNAYRGPT HDGGICSFAE LLRLVASIDG IDRLRFTTSH
PIEFTDDIID VYADTPELVS FLHLPVQSGS DRVLNLMKRN HTALEYKSII RKLKKVRPNI
QISSDFIVGF PGETDQDFED TMNLIAQVNF DMSFSFIYSA RPGTPAADMP DDVTEEEKKQ
RLYLLQQRIN NQAAQFSRAM LGTEQRVLVE GPSKKDIMEL TGRTETNRIV NFAGTPNMIG
KFVDIKITDV YTNSLRGEVV RTEDEMGLRI VQSPQVVINR TRKEDELGVG HYQG