Gene HS_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1113 
SymbolaroK 
ID4240614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1249823 
End bp1250314 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content37% 
IMG OID638104676 
Productshikimate kinase 
Protein accessionYP_719325 
Protein GI113461256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0015491 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGCTG GAAAAAGTAC AATCGGTCGT CAATTAGCAC AAATTTTAGG CATGGAATTT 
ATTGATACTG ATGCCGAAAT TGAACAACGT GCAGGTGCAG ATATTAGTTG GATTTTTGAC
GTTGAGGGTG AAGAAGGTTT TCGTAAACGC GAAGAACGTA TCATCAATGA ACTAACTCAA
AAACAAGGCA TTGTGCTTTC TACCGGTGGT GGTGCAATCG TATCAAAAGA TAATCGTAAT
TATTTATCTG CTCGTGGCAC CGTTATTTAT TTAGAAACGA CCGTTGAAAA ACAATTCCAA
CGTACTCAAC GTGATAAAAA ACGTCCATTA CTGCAAAATG TTGAAGATCC TCGCCAAGTA
TTAGAAGATT TAGCCAAAGT CCGCAACCCT TTATATGAAG AAGTGGCTGA TATTATTTTG
CCGACAGACG AGCAAAGTGC CAAATTAATG GCGAATCAAA TCATTGATTT AATTGATAAT
CTTAAAATCT AA
 
Protein sequence
MGAGKSTIGR QLAQILGMEF IDTDAEIEQR AGADISWIFD VEGEEGFRKR EERIINELTQ 
KQGIVLSTGG GAIVSKDNRN YLSARGTVIY LETTVEKQFQ RTQRDKKRPL LQNVEDPRQV
LEDLAKVRNP LYEEVADIIL PTDEQSAKLM ANQIIDLIDN LKI