Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1102 |
Symbol | fumC |
ID | 4240603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1237162 |
End bp | 1238556 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104665 |
Product | fumarate hydratase |
Protein accession | YP_719314 |
Protein GI | 113461245 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.184674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTC GTATCGAAAA AGACACTATG GGCGAAGTTC AAGTTCCTGC TGATAAATAT TGGGCTGCAC AAACAGAACG TTCTCGTAAC AATTTCAAAA TCGGTCCTGA AGCTTCGATG CCAAAAGAAA TTATTGAGGC TTTCGGTTAT TTAAAAAAAG CCGCCGCTTA TGCAAACCAT GATTTAGGTG TGTTAAATAC GGAAAAACGT GATTTAATCG CTCAGGCTTG CGATGAAATT CTTGCCAATA AACTTGATGA CCAATTCCCT CTTGTAATTT GGCAAACTGG TTCAGGCACT CAATCGAATA TGAATGTCAA TGAAGTTGTT GCAAACCGTG CACATGTCAT TCAAGGCGGT AAATTAGGAG AAAAATCCGT TATTCACCCG AATGATGATG TCAATAAATC CCAATCTTCA AATGATACTT ATCCTACCGC CATGCATATT GCCGCTTATA AAAAAGTGGT TGAACATACG TTACCTTGTG TCAGACGTTT GCAAAAAACG TTAGCAGAAA AAGCAGAATT GTTTAAAGAT GTTGTAAAAA TTGGTCGTAC TCATTTAATG GACGCTACAC CATTAACTTT AGGTCAAGAG TTTTCGGCGT ATGCGGCACA ACTTGCTTTC GGTATCAAGG CACTGGAAAA CACCTTACCG CATTTGCGTG AGCTTGCCTT AGGTGGCACA GCTGTTGGTA CAGGGCTAAA TACACCTAAA GGCTATGATG TAAAAGTAGC GGAATATATT GCTAAATTTA CAGGGTTACC TTTTGTTACC GCACAAAATA AATTTGAAGC TCTTGCAACT CATGATGCGA TTGTTGAAAC TCATGGTGCC TTAAAACAGT TAGCAGTTTC TCTTTACAAA ATCGCCAATG ATGTTCGTTT ATTGGCTTCA GGTCCACGCT CAGGCATTGG GGAAATTCTC ATTCCTGAAA ATGAGCCGGG TTCATCAATT ATGCCGGGTA AAGTAAACCC AACGCAATGT GAAGCAATGA CAATGGTTTG TGCACAAGTA CTAGGTAATG ATGTCACTAT TTCTTTCGCA GGTACACAAG GTCATTTCCA ATTAAATGTG TATAAACCCG TCATGGCATA CAATTTCTTA CAATCGGCAC AATTATTAGG TGATGCTTGT GTGTCATTTG ATGAACATTG TGCAATGGGT ATTGAGCCAA ACTATCCACG TATTAAGCAA CAACTGGAGC AATCTTTAAT GTTAGTTACC GCACTTAATA CGCATATTGG TTATGAAAAT GCAGCTAAAA TTGCGAAAAC TGCACATAAA AATGGTACAA CATTGAAAGA AGAAGCCATC AATCTTGGGT TGGTGAGTGC GGAACAATTC GATGAATGGG TACGTCCGGA AGATATGGTT GGCAGCTTAA AATAG
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Protein sequence | MAFRIEKDTM GEVQVPADKY WAAQTERSRN NFKIGPEASM PKEIIEAFGY LKKAAAYANH DLGVLNTEKR DLIAQACDEI LANKLDDQFP LVIWQTGSGT QSNMNVNEVV ANRAHVIQGG KLGEKSVIHP NDDVNKSQSS NDTYPTAMHI AAYKKVVEHT LPCVRRLQKT LAEKAELFKD VVKIGRTHLM DATPLTLGQE FSAYAAQLAF GIKALENTLP HLRELALGGT AVGTGLNTPK GYDVKVAEYI AKFTGLPFVT AQNKFEALAT HDAIVETHGA LKQLAVSLYK IANDVRLLAS GPRSGIGEIL IPENEPGSSI MPGKVNPTQC EAMTMVCAQV LGNDVTISFA GTQGHFQLNV YKPVMAYNFL QSAQLLGDAC VSFDEHCAMG IEPNYPRIKQ QLEQSLMLVT ALNTHIGYEN AAKIAKTAHK NGTTLKEEAI NLGLVSAEQF DEWVRPEDMV GSLK
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