Gene HS_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1102 
SymbolfumC 
ID4240603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1237162 
End bp1238556 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content39% 
IMG OID638104665 
Productfumarate hydratase 
Protein accessionYP_719314 
Protein GI113461245 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.184674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTC GTATCGAAAA AGACACTATG GGCGAAGTTC AAGTTCCTGC TGATAAATAT 
TGGGCTGCAC AAACAGAACG TTCTCGTAAC AATTTCAAAA TCGGTCCTGA AGCTTCGATG
CCAAAAGAAA TTATTGAGGC TTTCGGTTAT TTAAAAAAAG CCGCCGCTTA TGCAAACCAT
GATTTAGGTG TGTTAAATAC GGAAAAACGT GATTTAATCG CTCAGGCTTG CGATGAAATT
CTTGCCAATA AACTTGATGA CCAATTCCCT CTTGTAATTT GGCAAACTGG TTCAGGCACT
CAATCGAATA TGAATGTCAA TGAAGTTGTT GCAAACCGTG CACATGTCAT TCAAGGCGGT
AAATTAGGAG AAAAATCCGT TATTCACCCG AATGATGATG TCAATAAATC CCAATCTTCA
AATGATACTT ATCCTACCGC CATGCATATT GCCGCTTATA AAAAAGTGGT TGAACATACG
TTACCTTGTG TCAGACGTTT GCAAAAAACG TTAGCAGAAA AAGCAGAATT GTTTAAAGAT
GTTGTAAAAA TTGGTCGTAC TCATTTAATG GACGCTACAC CATTAACTTT AGGTCAAGAG
TTTTCGGCGT ATGCGGCACA ACTTGCTTTC GGTATCAAGG CACTGGAAAA CACCTTACCG
CATTTGCGTG AGCTTGCCTT AGGTGGCACA GCTGTTGGTA CAGGGCTAAA TACACCTAAA
GGCTATGATG TAAAAGTAGC GGAATATATT GCTAAATTTA CAGGGTTACC TTTTGTTACC
GCACAAAATA AATTTGAAGC TCTTGCAACT CATGATGCGA TTGTTGAAAC TCATGGTGCC
TTAAAACAGT TAGCAGTTTC TCTTTACAAA ATCGCCAATG ATGTTCGTTT ATTGGCTTCA
GGTCCACGCT CAGGCATTGG GGAAATTCTC ATTCCTGAAA ATGAGCCGGG TTCATCAATT
ATGCCGGGTA AAGTAAACCC AACGCAATGT GAAGCAATGA CAATGGTTTG TGCACAAGTA
CTAGGTAATG ATGTCACTAT TTCTTTCGCA GGTACACAAG GTCATTTCCA ATTAAATGTG
TATAAACCCG TCATGGCATA CAATTTCTTA CAATCGGCAC AATTATTAGG TGATGCTTGT
GTGTCATTTG ATGAACATTG TGCAATGGGT ATTGAGCCAA ACTATCCACG TATTAAGCAA
CAACTGGAGC AATCTTTAAT GTTAGTTACC GCACTTAATA CGCATATTGG TTATGAAAAT
GCAGCTAAAA TTGCGAAAAC TGCACATAAA AATGGTACAA CATTGAAAGA AGAAGCCATC
AATCTTGGGT TGGTGAGTGC GGAACAATTC GATGAATGGG TACGTCCGGA AGATATGGTT
GGCAGCTTAA AATAG
 
Protein sequence
MAFRIEKDTM GEVQVPADKY WAAQTERSRN NFKIGPEASM PKEIIEAFGY LKKAAAYANH 
DLGVLNTEKR DLIAQACDEI LANKLDDQFP LVIWQTGSGT QSNMNVNEVV ANRAHVIQGG
KLGEKSVIHP NDDVNKSQSS NDTYPTAMHI AAYKKVVEHT LPCVRRLQKT LAEKAELFKD
VVKIGRTHLM DATPLTLGQE FSAYAAQLAF GIKALENTLP HLRELALGGT AVGTGLNTPK
GYDVKVAEYI AKFTGLPFVT AQNKFEALAT HDAIVETHGA LKQLAVSLYK IANDVRLLAS
GPRSGIGEIL IPENEPGSSI MPGKVNPTQC EAMTMVCAQV LGNDVTISFA GTQGHFQLNV
YKPVMAYNFL QSAQLLGDAC VSFDEHCAMG IEPNYPRIKQ QLEQSLMLVT ALNTHIGYEN
AAKIAKTAHK NGTTLKEEAI NLGLVSAEQF DEWVRPEDMV GSLK