Gene HS_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1100 
Symbolorn 
ID4240600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1233784 
End bp1234338 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content34% 
IMG OID638104662 
Productoligoribonuclease 
Protein accessionYP_719312 
Protein GI113461243 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0275698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAG ATAAACAAAA TCTTATTTGG ATTGACTTGG AAATGACAGG CTTAGATCCT 
GATAAAGAAC GGATTATTGA AATCGCAACA ATTGTAACAG ATAAAGATCT CAATATTTTA
GCTGAAGGTC CTGTTTTAGC CATTCATCAA TCAAACGAAC TTCTCAATAA CATGAATGAA
TGGTGCGTGA AAACTCATAC ATCTAACGGC TTAATCGAAC GGGTAAAAAA CAGCAAATTA
ACAGAACGGG CTGCAGAATT ACAAACCTTG GATTTTCTAA AAAAATGGGT TCCTAAAGGT
GTTTCTCCTA TTTGTGGAAA TAGCGTTGCT CAAGACAAAC GTTTTTTAGT CAACTATATG
CCTGAATTAG CTGAATACTT TCACTATCGT CATTTAGATG TAAGCACACT AAAAGAACTC
GCATCAAGAT GGAAACCTGA AATTCTAAAT AGCTTTGAAA AAAAGAACAC ACATTTGGCG
TTAGATGATA TTCGTGAATC CATTGCTGAA TTAGCTCATT ATAGGAATAC CTTTATTAAC
TTAACAAACA AATAA
 
Protein sequence
MQLDKQNLIW IDLEMTGLDP DKERIIEIAT IVTDKDLNIL AEGPVLAIHQ SNELLNNMNE 
WCVKTHTSNG LIERVKNSKL TERAAELQTL DFLKKWVPKG VSPICGNSVA QDKRFLVNYM
PELAEYFHYR HLDVSTLKEL ASRWKPEILN SFEKKNTHLA LDDIRESIAE LAHYRNTFIN
LTNK