Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1100 |
Symbol | orn |
ID | 4240600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1233784 |
End bp | 1234338 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638104662 |
Product | oligoribonuclease |
Protein accession | YP_719312 |
Protein GI | 113461243 |
COG category | [A] RNA processing and modification |
COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0275698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTAG ATAAACAAAA TCTTATTTGG ATTGACTTGG AAATGACAGG CTTAGATCCT GATAAAGAAC GGATTATTGA AATCGCAACA ATTGTAACAG ATAAAGATCT CAATATTTTA GCTGAAGGTC CTGTTTTAGC CATTCATCAA TCAAACGAAC TTCTCAATAA CATGAATGAA TGGTGCGTGA AAACTCATAC ATCTAACGGC TTAATCGAAC GGGTAAAAAA CAGCAAATTA ACAGAACGGG CTGCAGAATT ACAAACCTTG GATTTTCTAA AAAAATGGGT TCCTAAAGGT GTTTCTCCTA TTTGTGGAAA TAGCGTTGCT CAAGACAAAC GTTTTTTAGT CAACTATATG CCTGAATTAG CTGAATACTT TCACTATCGT CATTTAGATG TAAGCACACT AAAAGAACTC GCATCAAGAT GGAAACCTGA AATTCTAAAT AGCTTTGAAA AAAAGAACAC ACATTTGGCG TTAGATGATA TTCGTGAATC CATTGCTGAA TTAGCTCATT ATAGGAATAC CTTTATTAAC TTAACAAACA AATAA
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Protein sequence | MQLDKQNLIW IDLEMTGLDP DKERIIEIAT IVTDKDLNIL AEGPVLAIHQ SNELLNNMNE WCVKTHTSNG LIERVKNSKL TERAAELQTL DFLKKWVPKG VSPICGNSVA QDKRFLVNYM PELAEYFHYR HLDVSTLKEL ASRWKPEILN SFEKKNTHLA LDDIRESIAE LAHYRNTFIN LTNK
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