Gene HS_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1089 
Symboltsf 
ID4240589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1219675 
End bp1220526 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content38% 
IMG OID638104651 
Productelongation factor Ts 
Protein accessionYP_719301 
Protein GI113461232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0664105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA TTACAGCAGC ATTAGTTAAA GAACTTCGTG AACGTACCGG TGCAGGTATG 
ATGGAGTGTA AAAAAGCATT AGTTGAAGCA AATGGTGATA TTGAGCTGGC TATCGACAAT
ATGCGTAAAT CGGGACAGGC AAAAGCTGCA AAAAAAGCAG GTCGTATAGC TGCTGAAGGT
GTTATTCGTG TACGCATTGG TTCCGGTTTT GGTGTTCTAG TTGAACTGAA CTGTGAAACA
GACTTTGTAG CAAAAGATAC CGGCTTCTTA GGTTTAGCTG ATGAAGTTGC TGATTACGCT
TTAGCAAACA AAGGAACAAC GATTGATACC TTAGCAACTC ATTTTGAAGA TAAACGTGCT
GCATTAGTTG CTAAAATTGG TGAAAATATG ACGATTCGTC GTGTTCAGTA TTTAGAGGGT
GATGTAATTG CTCAATACTT ACATGGTGCA AAAATTGGTG TGTTAGTAGC AGGATCCGGT
TCAGAAGAAG AATTAAGAAA AGTAGCAATG CACGTTGCAG CTTCTAAACC TGAATTCGTA
AATCCAGAAG ATGTTTCCGC TGAAGTTGTA GAACATGAGC GTCAAATTCA AATTGATATT
GCAATCAACT CAGGCAAACC AAAAGAAATC GCTGAAAAAA TGGTTGAAGG TCGTATGAAG
AAATTTACTG GTGAAGTGTC TTTAACCGGT CAAGCATTCG TTATGGATCC TTCAGTTTCT
GTCGGTGATT ACTTAAAATC AGTTAATACT TCAGTAACAA ACTTTATTCG TTTAGAAGTT
GGTGAAGGTA TTGAAAAAGT TGAAGAAGAT TTTGCGGCGG AAGTGGCTAA AATCACTGGT
AATAACGCAT AA
 
Protein sequence
MAEITAALVK ELRERTGAGM MECKKALVEA NGDIELAIDN MRKSGQAKAA KKAGRIAAEG 
VIRVRIGSGF GVLVELNCET DFVAKDTGFL GLADEVADYA LANKGTTIDT LATHFEDKRA
ALVAKIGENM TIRRVQYLEG DVIAQYLHGA KIGVLVAGSG SEEELRKVAM HVAASKPEFV
NPEDVSAEVV EHERQIQIDI AINSGKPKEI AEKMVEGRMK KFTGEVSLTG QAFVMDPSVS
VGDYLKSVNT SVTNFIRLEV GEGIEKVEED FAAEVAKITG NNA