Gene HS_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1065 
Symbolnth 
ID4240563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1178959 
End bp1179594 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content35% 
IMG OID638104626 
Productendonuclease III / DNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_719277 
Protein GI113461208 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0698164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AAAAACGTAT CGAAATATTA ACTCGTCTGC GTGATCAAAA TCCGCACCCC 
ACAACTGAAT TGCATTTTAA TACGCCTTTT GAATTACTTA TTGCAGTCAT TCTCTCTGCA
CAAGCAACAG ATAAAGGAGT AAATAAAGCA ACGGATAAAC TTTTTCCTTT AGCTAATACC
CCACAAGCCA TTTTAGATCT TGGTTTGGAT GAGTTAAAAA AATATATAAA AACGATTGGG
TTATACAATA GTAAAGCTGA AAATATTATT AAAACTTGCC GTGATTTAAT TGAAAAGCAC
AATGGTCAAG TTCCGGAAAA TCGAGAAGCA TTGGAAGCAC TGGCAGGCGT AGGCAGAAAA
ACGGCTAATG TTGTTCTTAA TACAGCTTTT GGTCATCCTA CTATTGCCGT TGACACACAT
ATTTTCCGAG TGTCTAATCG TACGGGATTT GCTCCCGGAA AAGATGTCAT AAAAGTAGAA
GAAAAATTAT TGAAAGTTGT ACCATCAGAG TTTAAAGTGG ATGTACACCA CTGGTTAATT
TTACATGGTC GCTATACTTG CATTGCAAGA AAACCGAGAT GTGGCTCTTG TATTATTGAA
GACTTATGTG AATTTAAAGA AAAAACAGAG ATTTAA
 
Protein sequence
MNKQKRIEIL TRLRDQNPHP TTELHFNTPF ELLIAVILSA QATDKGVNKA TDKLFPLANT 
PQAILDLGLD ELKKYIKTIG LYNSKAENII KTCRDLIEKH NGQVPENREA LEALAGVGRK
TANVVLNTAF GHPTIAVDTH IFRVSNRTGF APGKDVIKVE EKLLKVVPSE FKVDVHHWLI
LHGRYTCIAR KPRCGSCIIE DLCEFKEKTE I