Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1065 |
Symbol | nth |
ID | 4240563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1178959 |
End bp | 1179594 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638104626 |
Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_719277 |
Protein GI | 113461208 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0698164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC AAAAACGTAT CGAAATATTA ACTCGTCTGC GTGATCAAAA TCCGCACCCC ACAACTGAAT TGCATTTTAA TACGCCTTTT GAATTACTTA TTGCAGTCAT TCTCTCTGCA CAAGCAACAG ATAAAGGAGT AAATAAAGCA ACGGATAAAC TTTTTCCTTT AGCTAATACC CCACAAGCCA TTTTAGATCT TGGTTTGGAT GAGTTAAAAA AATATATAAA AACGATTGGG TTATACAATA GTAAAGCTGA AAATATTATT AAAACTTGCC GTGATTTAAT TGAAAAGCAC AATGGTCAAG TTCCGGAAAA TCGAGAAGCA TTGGAAGCAC TGGCAGGCGT AGGCAGAAAA ACGGCTAATG TTGTTCTTAA TACAGCTTTT GGTCATCCTA CTATTGCCGT TGACACACAT ATTTTCCGAG TGTCTAATCG TACGGGATTT GCTCCCGGAA AAGATGTCAT AAAAGTAGAA GAAAAATTAT TGAAAGTTGT ACCATCAGAG TTTAAAGTGG ATGTACACCA CTGGTTAATT TTACATGGTC GCTATACTTG CATTGCAAGA AAACCGAGAT GTGGCTCTTG TATTATTGAA GACTTATGTG AATTTAAAGA AAAAACAGAG ATTTAA
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Protein sequence | MNKQKRIEIL TRLRDQNPHP TTELHFNTPF ELLIAVILSA QATDKGVNKA TDKLFPLANT PQAILDLGLD ELKKYIKTIG LYNSKAENII KTCRDLIEKH NGQVPENREA LEALAGVGRK TANVVLNTAF GHPTIAVDTH IFRVSNRTGF APGKDVIKVE EKLLKVVPSE FKVDVHHWLI LHGRYTCIAR KPRCGSCIIE DLCEFKEKTE I
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