Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1064 |
Symbol | rnfE |
ID | 4240562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1178306 |
End bp | 1178962 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104625 |
Product | electron transport complex RsxE subunit |
Protein accession | YP_719276 |
Protein GI | 113461207 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0737938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTGTAA ACAAGGTTAA AACCGAAAGT GTATGGGCAA ATTTATTTAA ACAAGGATTT TGGCATAACA ACCCTGCCCT AGTTCAGCTA TTAGGACTCT GCCCTTTACT TGCGGTATCA AATTCAGCGA CAAATGCGTT AGGTTTAGGC ATTGCAACTA TTATCGTTTT AATTTGTAGC AATACTGTAG TTTCTTTGTT TCGCAAACAA ATCCCTCAAG AGATCCGTAT CCCCATTTAT GTGATGATTA TTGCGACTAC GGTAACGATA GTGCAACTTA TCATGAATGC TTATACTTAC ACCCTTTATC AAGCATTAGG TATTTTTATT CCATTGATTG TGACCAACTG CATTGTGATT GGGCGTGCGG AAGCGTTTGC CTCAAAAAAT ACCGTTTTAC ATTCTATTTT TGATGGGTTT GCTATGGGAC TTGGTATGAC CTTCAGTTTG TTTATTTTAG GTGCATTACG TGAAATTTTC GGTACGGGGA AATTATTTTT TGGTATAGAA AATTTATTTG GCGACTGGGC AAAATGTTTA CAACTGAACC TATTTCAATT AGACAATAGT TTCTTACTGG CAATCTTACC GCCCGGAGCG TTTATCGGTC TAGGCATTAT GTTAGCAATA AAAAACGTGA TAGATCACAG AAAATGA
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Protein sequence | MTVNKVKTES VWANLFKQGF WHNNPALVQL LGLCPLLAVS NSATNALGLG IATIIVLICS NTVVSLFRKQ IPQEIRIPIY VMIIATTVTI VQLIMNAYTY TLYQALGIFI PLIVTNCIVI GRAEAFASKN TVLHSIFDGF AMGLGMTFSL FILGALREIF GTGKLFFGIE NLFGDWAKCL QLNLFQLDNS FLLAILPPGA FIGLGIMLAI KNVIDHRK
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