Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1062 |
Symbol | rnfD |
ID | 4240560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1176538 |
End bp | 1177629 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638104623 |
Product | electron transport complex protein RnfD |
Protein accession | YP_719274 |
Protein GI | 113461205 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TGATTAGCTC CCCACATACT CATTCGGGGA AATTGACAGC CCGCATAATG TTATGGGTGA TTGTGGCAAT GTTACCGGCA ATCGCAGGGC AAGTATATTA CTTTGGATTT GGCGTTTTGA TCCAATCACT GTTGGCAATA AGTACGGCGT TATCCCTCGA GTTTGTTGTA ACCTTATTGC GTAAAAAACC AAAATTTTTT TATATTGGTG ATTTTAGCGT TGTTTTGACC GCACTTATTC TCGCTGTTGC CATTCCGCCT TATGCCCCCT ATTGGGTTAT TATTATCGGT ACATGTTGTG CTGTAATTTT AGGTAAACAT GTTTACGGCG GATTAGGACA AAATTTATTT AATCCAGCAA TGGTGGGCTA TGTCATTTTG CTTATTTCAT TTCCCCTACA AATGACAACT TGGTTACCTC CAATTCAACT GCTTAACGAA CCACCTCATT TTGCCGATGC GTATAAACTC ATTTTCCAAG GTGTTACCAC TGACGGTTTT AATTTAAGCC AATTAATATT GGCTATTGAC GGTATTAGCC AAGCAACGCC ATTAGACACA GTTAAAACAG CGATGCGGAA CAATTTATCT TCATTACACG AAGTCAGCTC ATCACCTATT TTCAGTTCGG TTCTACCATT GGGAAAAAGG GATATTGTTG AAGGAATGGG CTGGACACAA ATAAATTTAC TCTTTTTTCT AGGGGGTATC TTCCTAATTT GGAAAAAAAT TATTCATTGG CAAATTCCAA CCGCACTTTT AGCAACAATT TTTAGTTTTG CATTGTTGAA CTGGCTATTT TCCTCAGCTA CACCAAACCC AATTTGGCAT TTAGTCAGCG GTGCAACAAT GTTTGGGGCA TTTTTTATTG CTACCGATCC GGTTACCGCT TCAATTACAC CGAGAGGAAA ACTCATTTTC GGTGCATTAG TCGGATTATT AATCTGCTTA ATTCGTTTTT GGGGAAATTA TCCTGATGGC GTTGCTTTTG CTATTTTACT GGCGAATATT TGCGTGCCAC TAATTGATCA TTACACTCGT CCACGTGTTA TAGGTCATAA CAAAAAAGGA ATCAAACAAT GA
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Protein sequence | MFKMISSPHT HSGKLTARIM LWVIVAMLPA IAGQVYYFGF GVLIQSLLAI STALSLEFVV TLLRKKPKFF YIGDFSVVLT ALILAVAIPP YAPYWVIIIG TCCAVILGKH VYGGLGQNLF NPAMVGYVIL LISFPLQMTT WLPPIQLLNE PPHFADAYKL IFQGVTTDGF NLSQLILAID GISQATPLDT VKTAMRNNLS SLHEVSSSPI FSSVLPLGKR DIVEGMGWTQ INLLFFLGGI FLIWKKIIHW QIPTALLATI FSFALLNWLF SSATPNPIWH LVSGATMFGA FFIATDPVTA SITPRGKLIF GALVGLLICL IRFWGNYPDG VAFAILLANI CVPLIDHYTR PRVIGHNKKG IKQ
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