Gene HS_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1060 
SymbolrnfB 
ID4240558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1173948 
End bp1174538 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content39% 
IMG OID638104621 
Productelectron transport complex protein RnfB 
Protein accessionYP_719272 
Protein GI113461203 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAT TACATTACGT TCTGCTGGTT GTTGTTTTGC TTGCCGTTCT TTTTGGGGTA 
ATCTTAGGCT TTGCCTCCAT TAAATTAAAA GTTGAAGGCG ATCCTATCGT AGAAAAAATT
GATGCGTTAT TACCACAAAG TCAATGTGCA CAATGCGGTT ATCCTGGTTG CAAACCTTAT
GCTCAAGCTA TTGCGAATGG AGATGAAATT ACTAAGTGTG TACCTGGTGG GCAACCATTA
GTCATCAAAA TAGCAGATTT ATTAGGCATA GAAGCACCAG CGGGTAATTT TGAAAAAGAT
CCTCTACCCA AAGTGGCATT CATTGACGAA GATATGTGTA TTGGTTGTAC AAAATGTATT
CAAGCCTGCC CTGTCGATGC CATCATTGGT ACAAATAAAG CGATGCACAC CATTATTGCC
GATCTTTGTA CCGGTTGTGA ACTTTGTGTT GCACCTTGCC CAACAGATTG TATTTCAATG
ATCAACGTCA AACAACATAT TGATAACTGG GATTGGAAGT TCGATCCTAA GTTAGTTATT
CCCATCATTG ATACTACTTC AGCACAAAAG AAAATCGTTG TAGGAGAATA G
 
Protein sequence
MATLHYVLLV VVLLAVLFGV ILGFASIKLK VEGDPIVEKI DALLPQSQCA QCGYPGCKPY 
AQAIANGDEI TKCVPGGQPL VIKIADLLGI EAPAGNFEKD PLPKVAFIDE DMCIGCTKCI
QACPVDAIIG TNKAMHTIIA DLCTGCELCV APCPTDCISM INVKQHIDNW DWKFDPKLVI
PIIDTTSAQK KIVVGE