| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1035 |
|---|
| Symbol | hagA |
|---|
| ID | 4240533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1141355 |
|---|
| End bp | 1142422 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638104596 |
|---|
| Product | hemagglutinin antigen |
|---|
| Protein accession | YP_719247 |
|---|
| Protein GI | 113461178 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000658717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAATT TCTTGATAAT TAATATAGAG GAAATTCAAA TGAAAAAAAC AATTATTGCA
TTATCTATCG CAGGTTTTGT TGCTTCTGTG CAAGCGGCAC CTCAAGCAAA TACGTTCTAT
GCCGGTGCGA AAGCCGGTTG GGCATCTTTC CATGACGGTC TTAATCAATT TGAAGATTCT
TCACAAAAGA AAGGAACAGT TCGTAATTCA GTAGCTTATG GTATTTTTGG TGGTTACCAA
ATTACCGATC ATGTCGCTGT AGAGTTGGGT TCTGAGTATT TCGGTCAAGC AAAAGGTCGT
AAAGATAAAG ACGAAGCTAA ACATACCGCT CAAGGGATGC AATTAGGCTT AAAAGCAAGC
TACCCTGTAT TAGAAGGCTT GGATATTTAC GGTCGTGTAG GTGCGGCGTT AATTCGTTCT
AATTATCTTA ATGTTGAAAA ATTCGAAAGT GGTAAAGATG TAAAAAACAC TTTAAAAGTT
TCTCCGGTTT TCGCAGCGGG TGTTGAATAC AGCCTACCTT CTTTACCGGA ATTGGCATTA
CGTTTGGAAT ATCAATGGGT TAAAGGCGTT GGTAAAGCAC TTAAGAAAAG CAGTGGTGAA
CGCTTAGATT ATACACCAAG TATCGGTGCG GTAACACTTG GCTTATCTTA CCGTTTCGGT
CAAAAACCAG TTATGGCACC TGAAGTAGTA AACAAAGTGT TCAGCTTAAA TTCAGATGTG
AATTTTGCCT TCGCTAAAGA TACATTAAAA CCTGAAGCTC AACAAACATT GGACGGTGTT
TATGGTGAAA TCGCACAATT AAAAACCGCA CAAGTTTCTG TTGCCGGTTA TACAGACCGT
ATCGGTTCTG ATGCGTCAAA CTTAAAATTA TCACAACGTC GTGCGGATAC TGTAGCAAAT
TATTTAGTCT CTAAAGGTGT TGCTCAAGAT GCCATTAGTG CGGTAGGTTA CGGTGAAGCA
AATCCGGTGA CCGGTGCGAA ATGTGATGCT GTTAAAGGTC GTAAAGCACT AATCGCCTGT
TTAGCAGAAG ATCGTCGTGT TGAAATCTCA GTGAAAGGTA GCAAATAA
|
|---|
| Protein sequence | MLNFLIINIE EIQMKKTIIA LSIAGFVASV QAAPQANTFY AGAKAGWASF HDGLNQFEDS
SQKKGTVRNS VAYGIFGGYQ ITDHVAVELG SEYFGQAKGR KDKDEAKHTA QGMQLGLKAS
YPVLEGLDIY GRVGAALIRS NYLNVEKFES GKDVKNTLKV SPVFAAGVEY SLPSLPELAL
RLEYQWVKGV GKALKKSSGE RLDYTPSIGA VTLGLSYRFG QKPVMAPEVV NKVFSLNSDV
NFAFAKDTLK PEAQQTLDGV YGEIAQLKTA QVSVAGYTDR IGSDASNLKL SQRRADTVAN
YLVSKGVAQD AISAVGYGEA NPVTGAKCDA VKGRKALIAC LAEDRRVEIS VKGSK
|
|---|
| |