| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1020 |
|---|
| Symbol | rlmL |
|---|
| ID | 4240518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1124740 |
|---|
| End bp | 1126896 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638104581 |
|---|
| Product | 23S rRNA m(2)G2445 methyltransferase |
|---|
| Protein accession | YP_719232 |
|---|
| Protein GI | 113461163 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.164858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAC TTTTTGCTAC TACATCACGT GGTTTTGAAG AACTTTTAAA AGTTGAATTA
ACGGATCTTG GTGCTCAAGA ATGTCGAGTT GTACAAGGTG GAGTTCACTT TATTGCGAAT
GATGAAACGC AGTATCGCAT TTTATTATGG TCAAGATTGA GTTCTCGGAT TTTGTTACCG
CTTATTACAA CAAAAATTTA TAGTGATTTA GATTTATATT CTGCTATTGT TGGACAAAAT
TGGTTGACTC ATTTTGATGA ACGAGTCACT TTTTTGGTAG ATTTTAACGG TACTAATAGA
GAAATTCGCC ATACTCAGTT CGGTGCAATG CGTGTTAAAG ACGGTATTGT AGATTATTTT
GAGCGTCATG GAAAAACACG TCCAAATGTG GATAAAGAGT ATCCCGATAT TCGTATTCAT
GCCTATTTAA ATCAAGATGA GTTAGTTGTA TCTCTCGATT TGAGCGGAGA GGCGTTGCAT
CTGCGAGGTT ATCGTGAAGA TACAGGGAAA GCACCGTTAA GAGAAACATT AGCTGCTGCA
ATTGTTTTAC GTTCCAGTTG GGAAAAAGGG ACACCTCTTG TTGATCCTAT GTGCGGTTCC
GGTACTTTAT TGATTGAAGC AGCACAAATG GAAGCTCAGA TAGCACCACA ATTACATCGT
TTACATTGGG GATTTGATTT TTGGAAAGGT CATAATCAAG TTGTATGGGA AAAAGTAAAG
CAAGAGGCGG TTGAGCTTGC AGAGCAGGCA TTTAATCGAA AATTAACACC GCACTTTTGG
GGCTTTGATT TGGATCATCG AGTATTGAAG AAAGCACAGA AAAATGCTCA AAATGCAGGG
GTCTCACATC TCATTAAATG GCAACAAGGT GATGTTGCAG GATTGAAAAA TCCAACTGAA
CAAGAAATAG GAACAGTGAT TTGTAATCCG CCTTATGGTG AAAGATTAGG CACTACTCCG
GCTTTAATTG CTTTATATTC TGTATTCGGT CGTCAATTAA AAACAGAGTT TGCAGATTGG
AACGTTTCAA TTTTTAGTGG AGAACCTGCA TTGCTGGATT GTTTACGTTT ACGTGCGTAT
CGTCAATTTA AGGCAAAAAA CGGTCCTTTA GATTGTGTCC AAAAAAATTA CCATATTGCT
GTTCGTAAAC AGGTAGAAAG TGCGGTTGAA AATTCGCAAG AAAAAACATT GACTTTTGTA
TCGGAAAATA CACAAGTTGC ACAAGATTTC GCTAATCGTT TACGTAAAAA TATCAAGAAA
ATTGATAAAT GGGCTAATCA ACAAAAACTG GATGCTTATC GTTTATATGA TGCCGATTTA
CCTGAATACA ATTTGGCGGT TGATCGCTAT GCGGATCATA TTATAGTACA AGAATATGCG
GCACCTAAAA ATGTTGATGA AAATAAAGCT CGTCAGCGTT TATTGGATGC TGTAAGTGCT
ATTTTATTGG TAACAGGTAT TGAAACGAAT AAATTAATTT TAAAAGTACG TCAAAAACAA
AAAGGCACCA GTCAATATGA AAAACTCGCT AATAAGGGAG AGTATTTTTA TGTGCATGAA
TATGGTGCAA AATTATGGGT AAATTTAACT GATTATTTGG ATACAGGGTT ATTTTTAGAT
CATCGTTTGA CCCGTAAAAT GCTGGGAGAA ATGGCTGTAG GGAAAGATTT TCTTAACTTA
TTTGCTTATA CAGGATCTGC AACGGTTCAT GCTGCGTTGG GGTTGGCAAA ATCAACAACC
ACGGTAGATA TGTCAAATAC CTATTTAAAT TGGGCAGAAC AGAATTTGTT GTTAAATGAT
ATTGAAGGTA AACAGCATAA ACTAATTCAA GCAGATTGTT TGCAGTGGTT GAATAAATGT
GATCGTCAAT TCGATTTGAT TTTTGTTGAT CCTCCCACAT TTTCTAATTC TAAAAGAATG
GAAGATAGCT GGGATGTTCA ACGTGATCAT ATTAAGTTAA TGGCAAATCT AAAGCGTATC
CTACGAACAA ATGGAACTAT CGTTTTTTCC AATAATAAAC GAGGTTTTAA AATGGATATA
GACGGTTTGC AAGAATTAGA GTTAAGTGCG GTAGAAATTT CTGCTAAAAC GTTACCTTTA
GATTTTGAAC GGAATAAACA AATTCATAAT TGTTGGATTA TTCGACATCA ATCATAA
|
|---|
| Protein sequence | MKQLFATTSR GFEELLKVEL TDLGAQECRV VQGGVHFIAN DETQYRILLW SRLSSRILLP
LITTKIYSDL DLYSAIVGQN WLTHFDERVT FLVDFNGTNR EIRHTQFGAM RVKDGIVDYF
ERHGKTRPNV DKEYPDIRIH AYLNQDELVV SLDLSGEALH LRGYREDTGK APLRETLAAA
IVLRSSWEKG TPLVDPMCGS GTLLIEAAQM EAQIAPQLHR LHWGFDFWKG HNQVVWEKVK
QEAVELAEQA FNRKLTPHFW GFDLDHRVLK KAQKNAQNAG VSHLIKWQQG DVAGLKNPTE
QEIGTVICNP PYGERLGTTP ALIALYSVFG RQLKTEFADW NVSIFSGEPA LLDCLRLRAY
RQFKAKNGPL DCVQKNYHIA VRKQVESAVE NSQEKTLTFV SENTQVAQDF ANRLRKNIKK
IDKWANQQKL DAYRLYDADL PEYNLAVDRY ADHIIVQEYA APKNVDENKA RQRLLDAVSA
ILLVTGIETN KLILKVRQKQ KGTSQYEKLA NKGEYFYVHE YGAKLWVNLT DYLDTGLFLD
HRLTRKMLGE MAVGKDFLNL FAYTGSATVH AALGLAKSTT TVDMSNTYLN WAEQNLLLND
IEGKQHKLIQ ADCLQWLNKC DRQFDLIFVD PPTFSNSKRM EDSWDVQRDH IKLMANLKRI
LRTNGTIVFS NNKRGFKMDI DGLQELELSA VEISAKTLPL DFERNKQIHN CWIIRHQS
|
|---|
| |