Gene HS_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1013 
SymboltbpA 
ID4240506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1116733 
End bp1117749 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content37% 
IMG OID638104569 
Productthiamine ABC transporter, periplasmic-binding protein 
Protein accessionYP_719224 
Protein GI113461156 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0137605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCA AAACCACTCT AATTTTTACC GCACTTTCTG CGATGTCTAT TTGCTCTTTT 
GCTCAAGCGG AAGCGAAATC GGCACAAGGC TTAACCGTTT ATACTTATAA AAGTTTTTCC 
TCCGATTGGG GGGCAGGTCC AAAGGTGAAA CAAGGATTTG AGCAACAATA TCCGCAATGT 
CGGGTAAATT ATGTGTCCTT TGACAGTTCA GGTGTATTGT TCAATCGTCT GCGTTTAGAA 
GGTAAGAAAA CCAAAGCGGA TATTGTACTA GGCTTAAGTA ATCATTTATT ACAAGAGGCA 
ATTAAGTCTG AATTATTTAG TGAGCATAAA GTTGATTTAA ATAGACTTTC TTTACCGATT 
TCTTGGCAAG ATCGACGTTT TTTACCTTAT GATTTCGGGC ATTATGCTTT TATTTATGAT 
AAAACTAAAT TAGTAAATCC ACCGCAATCT TTGCAAGAGC TGGTTGAACG TCAGGATTTA 
CGAGTTATTT ATCAGGATCC TCGAACAAGC AGTGTGGGGC GGGGATTAAT CATTTGGTTA 
AATTTGGTGT ATCCACAACA AGAGGTAGAT CGAGCTTGGC AGACATTAGC TAAACATACT 
GTTACTGTCG GTAAAGGTTG GACGGAAAGT TATGGGGCAT TTTTAAAAGG TGAAGCGGAT 
TTAGTATTAA GTTATAGCAC CTCTCCACTT TATCATTTAT TAAATGAACA AAAAGATCAG 
TACCAAGCGA CAGATTTTGC TGAAGGCGGC GTTTTACAAG TTGAATTAGC AGCCAAAATA 
GCAAACAAAG AAAATGCCTG TGGCGATTTA TTTATGGATT ACTTGATTTC ACCGCAAGCA 
CAGACACATA TCGTTAAAAA TAATGTGATG TTATCTGTGA TTTCTGACCC TATTGAGCCA 
CATTATGATG CCTTAAAACA GTATCAGCTC AAAACAAATG TGTTTGACAG TTCCAATATT 
TCTGCTGAGC AACTAAAAAA ATGGATTAAT CAATGGCAAG CAAGTTTGGT GAAGTAA
 
Protein sequence
MNFKTTLIFT ALSAMSICSF AQAEAKSAQG LTVYTYKSFS SDWGAGPKVK QGFEQQYPQC 
RVNYVSFDSS GVLFNRLRLE GKKTKADIVL GLSNHLLQEA IKSELFSEHK VDLNRLSLPI 
SWQDRRFLPY DFGHYAFIYD KTKLVNPPQS LQELVERQDL RVIYQDPRTS SVGRGLIIWL 
NLVYPQQEVD RAWQTLAKHT VTVGKGWTES YGAFLKGEAD LVLSYSTSPL YHLLNEQKDQ 
YQATDFAEGG VLQVELAAKI ANKENACGDL FMDYLISPQA QTHIVKNNVM LSVISDPIEP 
HYDALKQYQL KTNVFDSSNI SAEQLKKWIN QWQASLVK