| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1006 |
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| Symbol | cadB |
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| ID | 4240499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1107112 |
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| End bp | 1108428 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638104562 |
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| Product | lysine/cadaverine antiporter |
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| Protein accession | YP_719217 |
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| Protein GI | 113461149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000705878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACAA AAAAAATTGG TTTAGTCGCC TGTATTGCGG TGGTTGCAGG TAATATGATG
GGAAGCGGTA TAGCACTTCT TCCTTCAAGT TTAGCTAAGA TTGGATCTAT TGCTATTTTT
GGATGGATAA TAGCAATAAT AGGAGCTTTA GCACTTGCAT ATGTTTTTGC TAGACTCAGT
ACAAAAAATC CTCAAGCTGG AGGACCTGTA GCTTATGCAG GTGAAGTTTC ACCTATATTT
GGCTACCAAA CATCAATTTT ATACTACCAC GCAAATTGGA TTGGTAATTT AGCTATCGCT
ATTACTGCCA TTGCTTATCT ATCAACATTT TTTCCTATTT TAAATGAACC TATTCCGGCA
GCAATTGCAG CCATATGTGC AGTTTGGTTT TTTACTTTTA TCAATTTGTT AGGTGGCACA
TGGGTTAGTC GCTTTACCTC TATAGGATTA ATTTTGGTAT TAATTCCAGT TGTTGGTACT
GCTTTACTAG GTTGGACACA TTTTAACGTG GAAATTTATA AAGCAAACTG GTTGGCTAAT
CCAGATGTGC ATTCCATGAA AGCAGTGATT AATTCAGTAT TGTTATGTTT ATGGGCTTTT
GTTGGGGTTG AATCTGCTGC AGTGAGTAGC GATTTAGTTG AGAATCCTAA TAAGACAGTT
CCTCTAGCCA CATTATTAGG TACAGGATTA GCGGGAATTA TTTATGTTAT GGCATCTCAA
GTAATTTCAG GCATGTTCCC TAATGAAATT ACTGCTACAT CAGGGGCTCC TTTTGCCTTA
AGTGTCTCCG CTATTGTAGG TGATTGGGCA AGTCCTATTG TATCAGCGTT TACTGCAATA
GCTTGTCTTA CGTCTTTAGG CTCATGGATG ATGTTAGTTG GACAAGCTGG TAGAAGGGCT
GCTGATGATG GTAATTTCCC TAAAATGTTC GGTGAAGTAG ATAAGAATGG AACACCAAAA
AAAGGACTAT TTGCCGCCTC AATAATGATG ACGATTTTGA TGATCCTACT TACCATAGTG
ACAACTAGCG GATCTAGTGC ATCAGATTTA TTCACTCAAT TAACCAGCGT AGCTGTTCTC
TTAACCATGT TCCCATATTT TTATTCCATT ATAGATTTAA TTCGCTTAGA AGGATTAACT
TCTAAAAGCA CATTTAGTTT AATTGCCTCA AGTTTAGCAA TCCTATTTTG TTTTGCCGCA
CTTGCTGGAG CTGAACATTA TCAAATCACA GCAACAATTC TAATCGCTTT ATGTATCTTC
GCTTTTTATG CAAAGAAATT AGGTACAAAA CAATTACATC AAATAAACAA TCATTAA
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| Protein sequence | MNTKKIGLVA CIAVVAGNMM GSGIALLPSS LAKIGSIAIF GWIIAIIGAL ALAYVFARLS
TKNPQAGGPV AYAGEVSPIF GYQTSILYYH ANWIGNLAIA ITAIAYLSTF FPILNEPIPA
AIAAICAVWF FTFINLLGGT WVSRFTSIGL ILVLIPVVGT ALLGWTHFNV EIYKANWLAN
PDVHSMKAVI NSVLLCLWAF VGVESAAVSS DLVENPNKTV PLATLLGTGL AGIIYVMASQ
VISGMFPNEI TATSGAPFAL SVSAIVGDWA SPIVSAFTAI ACLTSLGSWM MLVGQAGRRA
ADDGNFPKMF GEVDKNGTPK KGLFAASIMM TILMILLTIV TTSGSSASDL FTQLTSVAVL
LTMFPYFYSI IDLIRLEGLT SKSTFSLIAS SLAILFCFAA LAGAEHYQIT ATILIALCIF
AFYAKKLGTK QLHQINNH
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