Gene HS_1000 details

Gene Information

• Locus tag: HS_1000
• Symbol: greA
• ID: 4240493
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1102586
• End bp: 1103062
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 638104556
• Product: transcription elongation factor GreA
• Protein accession: YP_719211
• Protein GI: 113461143
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.302487
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAAA TTCCAATGAC TGTACGTGGT GCGGAACAAT TAAGAGAAGA ATTAGATTTT 
TTGAAAAATG TGCGTCGTCC GGAAATTATC AAGGCAATTT CAGAAGCACG TGAACATGGC 
GATTTAAAAG AAAATGCGGA ATATCATGCA GCACGTGAAC AGCAAGGCTT TTGCGAAGGG 
CGTATTCAAG AAATTGAAGG TAAATTAGCA AATTGCCAAA TTATTGATGT AACAAAATTA 
CCTAATAATG GTAAAGTGAT TTTTGGTGCA ACGGTCGTTT TGTTAAATAT TGATACCGAC 
GAAGAAGTCA CTTACCGAAT CGTTGGAGAT GATGAGGCGG ATATTAAATC GGGTTTAATT 
TCTGTTAATT CGCCTATTGC TCGCGGTTTA ATCGGCAAGG ACGTTGATGA TACTGTTGTC 
ATTACAACAC CTGGCGGTAA AGTTGAATTT GAAATCGTTG AAGTAGAATA TAAATAA 

 

Protein sequence

MKQIPMTVRG AEQLREELDF LKNVRRPEII KAISEAREHG DLKENAEYHA AREQQGFCEG 
RIQEIEGKLA NCQIIDVTKL PNNGKVIFGA TVVLLNIDTD EEVTYRIVGD DEADIKSGLI 
SVNSPIARGL IGKDVDDTVV ITTPGGKVEF EIVEVEYK