| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0980 |
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| Symbol | |
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| ID | 4240473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1078572 |
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| End bp | 1080980 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104536 |
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| Product | surface antigen |
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| Protein accession | YP_719191 |
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| Protein GI | 113461123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00787602 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TGTTAATTGC AAGCCTATTA TTTGGCTCGA CTGGTCTGGT TGCCGCACCG
TTTGTCGTGC AAGATATTCG TATAAACGGT ATTCAAGCAG GTAAGGAAAG TGCGGTGTTA
TCTGGATTGC CGGTTCGAAT TGGACAAAAA GCAACGGAGA GTGATATTTC AAATGTCGTA
AGACTATTAT TTTTGCGTGG CTATGATAAT GTGCAAGCTG TTCGTGAAGG AAATACCTTA
GTCATTTCTG TATTACCACG CTTAGTGATT GCGGAAGTGA AAGTGGAGGG AAATGAATCT
ATTCCTAGTG AAGCAATACG AGAAAACTTG AAAGCGAACG GATTTGCTAG CGGTGATATT
TTAAATCGGG AAAAATTGGA AGCGTTTCGT GGAAGTTTAG TTGATCATTA TCAGTCTGTC
GGTCGTTATA ATACGACTGT AGAGGCAATT GTTAATCCAT TATCAAATGA TCGAGCAGAA
GTAAAACTTA AAATAAAAGA AAGTGATGTG GCAAAACTGA AAGAAGTGCG TTTTGAGGGC
AATGAAGCAT TTAGCAGTAG CCAATTACAA GAGCGGATGG AATTACAGCC GGATGCTTGG
TGGAAGTTAT TTGGGAATAA ATTTGATACC AATCAATTTA ACCAAGATTT GGATCTTATT
CGTGATTTTT ATTTAGAACA TGGTTATGCA AAATTTCAAA TCGTTGGTAC TGATGTTCAG
CTAAATGACG AAAAAACTGA GGTTAGAGTT AGAATTCAAG TTAACGAAGG TGATAAGTAT
TCTGTAAATA GTGTCCGAAT CGTTGGTGAT GTAGGCGGTA TGTCAGAAGA GTTAGCACCG
TTACTTAAAA ACATTTATGT CGGAGAAACT TTCCGTCGTA GTGAAGTTAG CAGTGTTGAA
CAATTGATAA AAGCAAAATT AAGCGAGCAA GGCTATGCAA CGGCAAAAGT AGATGTTAGT
TCAGTCTTTA ATGAAGAGAA CAAAACGATT GATTTAACGT TTGTTGTTGA TGCGGGACAT
CGTTATTCTG TTCGTCAAAT CCGCTTTGAG GGGAATACGA TTACTGCCGA TAGTACATTA
CGTCAAGAAA TGCGTCAACA AGAGGGGGCT TGGTTATCAT CTCAATTAGT TGAGTTAGGG
AAAATTCGTC TAGAGCGTAC CGGATTTTTT GAGTCAGTGG AAACGGAAAC TCGAACCAAT
CAACAAATTA ACGACCAAGT TGATGTCATT TATCGAGTCA AAGAACGCAA TACAGGGAGT
TTGAACTTCG GTATTGGTTA TGGTACCGAA AGTGGTATAA GTTATCAGGC AAGTATTAAA
CAGGATAATT TCTTGGGCAT GGGTTCCTCG ATTAGTTTAG CTGGTTCACG CAACAATTAT
GGCACCAGTC TTAATTTAGG TTATAACGAA CCGTACTTTA CTAAAGATGG TGTAAGTTTA
GGTGGAAACG CATTTTTTGA AAAACACGAT AACTCAAAAA GTGATACTGC AGCCGCCTAT
GGACGTACAA CTTACGGTCT AAGTGGAAAT TTAAGTTTTC CGGTCAATGA AAATAACTCC
TATTATTTAA GTTTAGGGCA TATTTATAGC CAATTAAAAA ATGTGACGAA AGAATATAAT
CGTGATTTAT ATCGCAAATC AATGGGGTAT CCTGATAGTG CTAGATGGAA TTTTAAATCA
CACGACTTTG AATTTTCATT CGGCTGGAAC TATAACAGCT TAAACCGTGG CTATTTGCCT
ACCTCCGGAG TAAGAGCGAA TGTTGGCGGT AAAGTAACAA TCCCAGGTTC AGATAACAGA
TACTATAAAG TGAGTGCTGA AGTGCAGGGT TTTTATCCAT TGGATCGTGA TCATTATTGG
GTACTGACAG GTAGATTGTC AGGATCATAT GCAAACGGTT TTGGCGGTAA ACGTTTACCG
TTTTATCAAA CTTATTCTGC TGGAGGCATA GGAACTGTAC GTGGTTTTGA ATATGGTGCA
ATAGGACCAA AAGCGATTTA TCAAGAGAAT AGATGTAATG GAAATTCAAT GCAAAGTACA
AGCCAAAGCC AATATACATG CCATAGCAAA GATATTGTTG GCGGAAATGC CATGACATTG
GCAAGTATTG AACTTATTGT TCCGACACCG TTTGTAGCAG AGAAAAACCA ACGATCAGTG
AGAACATCTA TCTTTGCCGA TGCTGGTTCT GTATGGAATA CTAAATGGAA ATCAGATGGT
AAACCGTTTG CTGGAGATAA AAATATACCT GACTACGGGA ACCCAGCCCG TATAAGAGCT
TCAGCAGGGA TTGCGTTCCA ATGGTATTCT CCGATTGGAC CTTTAGTATT CTCTTATGCT
AAACCACTGA AAAAATATCA AGGTGACCAA ATTGAACAAT TCCAATTTAG TATTGGTGGT
TCTTTTTAG
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| Protein sequence | MKKLLIASLL FGSTGLVAAP FVVQDIRING IQAGKESAVL SGLPVRIGQK ATESDISNVV
RLLFLRGYDN VQAVREGNTL VISVLPRLVI AEVKVEGNES IPSEAIRENL KANGFASGDI
LNREKLEAFR GSLVDHYQSV GRYNTTVEAI VNPLSNDRAE VKLKIKESDV AKLKEVRFEG
NEAFSSSQLQ ERMELQPDAW WKLFGNKFDT NQFNQDLDLI RDFYLEHGYA KFQIVGTDVQ
LNDEKTEVRV RIQVNEGDKY SVNSVRIVGD VGGMSEELAP LLKNIYVGET FRRSEVSSVE
QLIKAKLSEQ GYATAKVDVS SVFNEENKTI DLTFVVDAGH RYSVRQIRFE GNTITADSTL
RQEMRQQEGA WLSSQLVELG KIRLERTGFF ESVETETRTN QQINDQVDVI YRVKERNTGS
LNFGIGYGTE SGISYQASIK QDNFLGMGSS ISLAGSRNNY GTSLNLGYNE PYFTKDGVSL
GGNAFFEKHD NSKSDTAAAY GRTTYGLSGN LSFPVNENNS YYLSLGHIYS QLKNVTKEYN
RDLYRKSMGY PDSARWNFKS HDFEFSFGWN YNSLNRGYLP TSGVRANVGG KVTIPGSDNR
YYKVSAEVQG FYPLDRDHYW VLTGRLSGSY ANGFGGKRLP FYQTYSAGGI GTVRGFEYGA
IGPKAIYQEN RCNGNSMQST SQSQYTCHSK DIVGGNAMTL ASIELIVPTP FVAEKNQRSV
RTSIFADAGS VWNTKWKSDG KPFAGDKNIP DYGNPARIRA SAGIAFQWYS PIGPLVFSYA
KPLKKYQGDQ IEQFQFSIGG SF
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