Gene HS_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0979 
Symbolskp 
ID4240472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1077891 
End bp1078475 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content36% 
IMG OID638104535 
Productouter membrane protein 
Protein accessionYP_719190 
Protein GI113461122 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.536897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG CAGTAAAACT GACCGCTCTT TCTATCGCAT TAGGCTCATC AATTGCAATG 
GCAAGTGATA ATATCGCTGT TGTTAATACA GAGTACTTGT TTTTAAATCA CCCTGCTCGC 
TTGCTTGAGT TTCAAAAATT AAATAAGGAA TTTAAAGCAC CAGCAGAAAA ACTGGAAGCA 
GCAGATAAAG CATTAGTTGA AAAACGTGCC AATTTTGAAA AAGAAATTGA AACAAAAAGT 
AAAGCATTGG AAAAAGATGC ACCGAAACTA CGTCAAGCTG ATATCAAAAA ACGTCAAGAT 
GAAATTGCTA AATTGGTAAC AAAACGTAAT GACGAGTTTA ACAAGCTGGT AGCGGAACAC 
CAAAAAAATG TTGCAGCGTT TCAAGCTGAA GCACAAAAAC GTGATGCCGA AATTACTCAA 
CGTTTATTAA AAGAGGTTCA AACAGCTACA ACGAATGTAG CTAAAGCCAA AAACTTTACA 
ATTGTATTGG ATGAAAAAAC GGCAATTTAT GTTGCTGACG GTAAAAATAT TACCGAGGAA 
GTTCTAAAAG CTATTCCGGC TCCAGCTCCT GCAAAGGCTA AGTAA
 
Protein sequence
MKNAVKLTAL SIALGSSIAM ASDNIAVVNT EYLFLNHPAR LLEFQKLNKE FKAPAEKLEA 
ADKALVEKRA NFEKEIETKS KALEKDAPKL RQADIKKRQD EIAKLVTKRN DEFNKLVAEH 
QKNVAAFQAE AQKRDAEITQ RLLKEVQTAT TNVAKAKNFT IVLDEKTAIY VADGKNITEE 
VLKAIPAPAP AKAK