Gene HS_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0978 
SymbollpxD 
ID4240471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp1076866 
End bp1077891 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content41% 
IMG OID638104534 
ProductUDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
Protein accessionYP_719189 
Protein GI113461121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0109084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGAT ATTCTTTACT GGAATTGGCT CAACAAATCG GCGCTACCAT TCGTGGTAAC 
GCCGATGTTA TTGTAACGGA CATAGCACCT TTAGATAAAG CGGATAACAA CCAACTGACC 
TTTATTTCCA ATCCTAAATT TCGAGAACAT TTGCTTCAAT CACAAGCCGG TGCATTAATC 
GTAACCGAAA GTGATATCGA ATTCTGTTCT GCACAAAGTA ATTTGCTCGT AGTAAAAGAT 
CCTTATGTTG CATACGCTAT TTTGGCACAA TACATGGATA GCACACCCAA AGCGGCTCAA 
GGCATTCACC AAAGTGCGGT CGTTTCCGAC ACAGCAACGT TAGGTCAACA TGTTTCCATT 
GGGGCTAATG CGGTGATTGA AGACGGAGTT ATACTTGGTG ACAATGTGGT GATTGGTGCA 
GGTTGCTTTA TCGGTAAACA TGTGCAGATT GGTGAAAATA CCCAGCTTTG GGCAAATGTC 
AATATTTATC ATGACGTTAA AATCGGCTCA GATTGTCTCA TTCAATCAGG TGCGGTAATT 
GGTAGTGATG GATTTGGTTA TGCAAATGAT CGTGGTCGCT GGATTAAAAT TCCACAAACG 
GGAACTGTCA TTATAGGCAA TCATGTTGAA ATCGGTGCTT GCACCTGTAT TGACCGAGGT 
GCACTTGATG CGACTGTGAT TGAGGATAAT GTAATCATAG ATAATCTTTG CCAAATTGCA 
CATAATGTTC ATATTGGAAC AGGTACTGCT GTTGCCGGCG GTGTTATTAT GGCGGGTAGT 
TTGAAAGTTG GTCGCTATTG CTTAATTGGC GGAGCAAGTG TTATTAATGG GCATATGGAA 
ATTTGTGATA AAGTAACAAT TACTGGAATG GGTATGGTGA TGCGACCAAT CACAGAACCG 
GGAATATATT CTTCCGGAAT TCCGTTACAG CCAAATAAGG TATGGCGTAA AACTGCCGCA 
TTAACTTTAG ATATTGATAA AATAAACAAG CGATTGAAGG CTGTTGAGAA GAAATTAGCC 
GAATAA
 
Protein sequence
MQGYSLLELA QQIGATIRGN ADVIVTDIAP LDKADNNQLT FISNPKFREH LLQSQAGALI 
VTESDIEFCS AQSNLLVVKD PYVAYAILAQ YMDSTPKAAQ GIHQSAVVSD TATLGQHVSI 
GANAVIEDGV ILGDNVVIGA GCFIGKHVQI GENTQLWANV NIYHDVKIGS DCLIQSGAVI 
GSDGFGYAND RGRWIKIPQT GTVIIGNHVE IGACTCIDRG ALDATVIEDN VIIDNLCQIA 
HNVHIGTGTA VAGGVIMAGS LKVGRYCLIG GASVINGHME ICDKVTITGM GMVMRPITEP 
GIYSSGIPLQ PNKVWRKTAA LTLDIDKINK RLKAVEKKLA E