| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0971 |
|---|
| Symbol | ompH |
|---|
| ID | 4240464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1070718 |
|---|
| End bp | 1071668 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638104527 |
|---|
| Product | ompH family outer membrane protein |
|---|
| Protein accession | YP_719182 |
|---|
| Protein GI | 113461114 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000094699 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA CATTAGTAGC ATTAGCAGTA GCGGCAGTTG CGGCATCAGC AAGCGCAACA
ACAGTTTATA ATCAAAATGG CACCAAAGTA GAAGTTGGTG GTCGTCTTGA TGTAATGTTA
GGTAAATTTG GTAAAGATCA GCGTGCAGAT TTACGTAATA ATGACTCTCG TTTGGAGTTT
AAAGTTGAGC ATGAAATCCA AAACGGCTTA AAAGCATTAG GTTTCTATCG TTTAGGTTTG
GGTAAGAAAG ACTCCGATAG ATCTTTTGAC GACATAGAAA CTAAAAAATT ATGGTTAGGA
TTAGAACAAG ATGGTGTCGG TCGTGTAACC TTCGGTAAAC AAGATACAAC GGCTGATGCT
GTTCAAATGA ATGACCATGC GTATATCTTT GGTGGTAATA ACAACCTAGT TGATAGTGGT
GATAAAGTTA TTTCTTTCCG TTCGGCGGAT TGGAAATTGG CTGAAGGACA AACTTTAGGC
TTCGGTCTTG ACTATGGGTT TGGTAGTTCA AAAAAAGAAA ATAAAGACAA TACTTACGGA
GTATCTGCAT TTTACGCAGG TCAGTTTGGA GACTTTACTG CGGGGCTAAA CGCTGGTTAT
ACATTTGAAA AAATGGTAGA TGGGAAGAAA ACCAAATCTT GGCGTGTAGC AACGCAAGCA
GGCTTTGGTC CAGCATCATT TGGGGTTGAA TATGGTCAAA GCAAAAAACC AGATAATGTT
AAGGAGAAGA GTCTCCTAGT TGGGGCAAAA TATGGTGTAT TGCCAGACGT GTCTAACTTG
TATGCTCAAT ATCAACATAA TAAGAAAGGT AACGAAAAAG CAGAAAAAGT ATATATCGTC
GGTGCGGATT ATGCCTTTAA TAAAAATGTA GTAGCGTATG CGGAATTTGC TAACAAACGT
CAAGATGACA AAGAAAATAA ATACGCAGCA GGTTTACGTG TTTATTTCTA A
|
|---|
| Protein sequence | MKKTLVALAV AAVAASASAT TVYNQNGTKV EVGGRLDVML GKFGKDQRAD LRNNDSRLEF
KVEHEIQNGL KALGFYRLGL GKKDSDRSFD DIETKKLWLG LEQDGVGRVT FGKQDTTADA
VQMNDHAYIF GGNNNLVDSG DKVISFRSAD WKLAEGQTLG FGLDYGFGSS KKENKDNTYG
VSAFYAGQFG DFTAGLNAGY TFEKMVDGKK TKSWRVATQA GFGPASFGVE YGQSKKPDNV
KEKSLLVGAK YGVLPDVSNL YAQYQHNKKG NEKAEKVYIV GADYAFNKNV VAYAEFANKR
QDDKENKYAA GLRVYF
|
|---|
| |