Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0939 |
Symbol | alr |
ID | 4240432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1039001 |
End bp | 1040080 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638104495 |
Product | alanine racemase |
Protein accession | YP_719150 |
Protein GI | 113461082 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTCA TACCTCCAAC AGCCAGGATT AGTTCTGTTG CATTAAAACA TAATATTCAA GTTATTAAGC AAAAAGCCAA AAACAGTAAA GTCATTGCAA TTGTTAAGGC AAATGCTTAT GGACATGGTT TGGAGTTCGT TTCCTCTACT CTGCATCATT TGGTTGACTG TTTTGGTGTG GCTAGATTAT CGGAAGCATT ACGTCTATGT GCTGAAGGTA TTACTAAACC TATTTTATTG TTAGAGGGTT TTTTTTCCGA GGATGATTTG CCAATTATTG CTGTTAATAA TATTCAAACA GTTATCCATA ATCAAGAACA GCTTTATGAG CTTAAGAAAG CCAAGTTGCC GAATAAAATT AAAGTATGGT TGAAAATTGA CACAGGAATG CATCGTTTAG GTGTAGATCT TGAACAGGTA GAAGACTTTT ATCAGCAACT TGTTCAATGT TCAAATGTAA AAGAAATTGG GTTTTTGAGT CATTTTAGCC GGGCAGATGA ATTGATGTGT GGTTATACGG AAATTCAGTT AGAGCGTTTT TTACAAGTTA CCGAGGGTAA ACAAGGTGAG CGATCTATTG TTGCCTCATC AGGTATTTTG TTTTGGCAGC AAGCCTATTT AGATTGGATT CGTCCAGGTA TTATTATGTA TGGTATCTCG CCGAATAATA CGCCTGCTGA GGTTTATGGA TTGATTCCGG TTATGACGTT AACTTCTTCA TTAATTACTA TTAGAAATCA TAAAAAAGGT GAACCTGTGG GGTATGGTGG AAGTTGGATT AGTGAGAGAG ATACCAAAAT AGGCGTTGTA GCTATTGGGT ATGGAGATGG TTATCCACGG GATATGCCTC AAGGTACACC GGTCTATATT AATGGCAGAA AAGTACCAAT TGTTGGGCGT GTATCGATGG ATATGTTAAC GGTAGATCTT GGTATTGAGA GTCAAGATAA GGTGGGTGAT GAAGTTATTT TATGGGGAAA GGAATTACCT ATTGAGGAAA TTTCTGCAAT TAGCGGTATG ATAAGCTATG AACTTATCAC TAAATTAACA CCTAGAGTAT TGATCGAATA TATTGATTAA
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Protein sequence | MNVIPPTARI SSVALKHNIQ VIKQKAKNSK VIAIVKANAY GHGLEFVSST LHHLVDCFGV ARLSEALRLC AEGITKPILL LEGFFSEDDL PIIAVNNIQT VIHNQEQLYE LKKAKLPNKI KVWLKIDTGM HRLGVDLEQV EDFYQQLVQC SNVKEIGFLS HFSRADELMC GYTEIQLERF LQVTEGKQGE RSIVASSGIL FWQQAYLDWI RPGIIMYGIS PNNTPAEVYG LIPVMTLTSS LITIRNHKKG EPVGYGGSWI SERDTKIGVV AIGYGDGYPR DMPQGTPVYI NGRKVPIVGR VSMDMLTVDL GIESQDKVGD EVILWGKELP IEEISAISGM ISYELITKLT PRVLIEYID
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