Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0883 |
Symbol | trpH |
ID | 4240375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 961769 |
End bp | 962578 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104438 |
Product | TrpH protein |
Protein accession | YP_719093 |
Protein GI | 113461026 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.33957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATTGCC ATAGTTCTAT ATCTGACGGT ACCTTATCAC CACAAGAGAT AGTGATAAGG GCACATCAAC AAGGTGTAAA TGTTTTAGCC TTGACAGATC ATGATACTAT TGCAGGATTA TCGCAAGCTC GTACTCAAGC AGAACAATTA GGCATTTCAC TGATCAATGG TGTTGAAATT TCTACTTCTT GGGAAAATTA TAGTATCCAT ATTGTAGGAT TAGGTTTTGA TGAAAATTCA AAAAAAATGA CCGCACTTTT GAATGAGCAG GCAAAAATTC GCTTACAAAG AGCGGTTGAA ATCGGGAAAA AATTGGAGCA TTTAGGTGTA GCCAACGCCT TTGCAGAAAC GCAAAAACTG ACGGATGGAG AAGTAACAAG AGCACATTAT GCCCGTTATT TAGTGCAAAT AGGCAAGGTT ATTAACATTA GTCAAGCTTT TAAAAAATAC TTAGCACAAG GAAAATCTGC ATATGTCAAA ACACAATGGG TTGATATTCC TAATGCAATA GAGATTATTC ATCAAGCCAA CGGAATTGCA GTGCTTGCTC ATCCATTACG CTATACTATG ACAACAAAAA AGATAAAACG TCTTATCGCT GATTTTAAAC AGTGGGGTGG GGATGCAATA GAAGTAGCAG GTTGTGGACA AACCAAGGAT CAACGTTTAT TACTTGCTCA TTGGGCGGAA GAGTACGATT TATACAGTTC CGTTGGTTCC GATTTTCATT TTCCAAGCAA TTGGATTGAA TTGGGAAAAT CTCTAGTGTT ACCGGAAAAT TGTCGTCCTG TTTGGGATTT ATTGCGTTAA
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Protein sequence | MHCHSSISDG TLSPQEIVIR AHQQGVNVLA LTDHDTIAGL SQARTQAEQL GISLINGVEI STSWENYSIH IVGLGFDENS KKMTALLNEQ AKIRLQRAVE IGKKLEHLGV ANAFAETQKL TDGEVTRAHY ARYLVQIGKV INISQAFKKY LAQGKSAYVK TQWVDIPNAI EIIHQANGIA VLAHPLRYTM TTKKIKRLIA DFKQWGGDAI EVAGCGQTKD QRLLLAHWAE EYDLYSSVGS DFHFPSNWIE LGKSLVLPEN CRPVWDLLR
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