| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0854 |
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| Symbol | truC |
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| ID | 4240346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 931549 |
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| End bp | 932253 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104409 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_719064 |
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| Protein GI | 113460997 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000219419 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGATATTT TATATCAAGA TGAGTTTCTC GTTGTAGTGA ATAAACCTGC CGGAATGTTG
GTTCACCGCA GTTGGCTAGA TCGTCATGAA ACTCAATTTG TTATGCAAAC TTTACGAGAT
CAAATTGGTC AACATGTTTT TCCTATTCAT CGTTTAGATC GTCCGACATC AGGTGTTTTA
CTTTTTGCCT TAAATGCCGG AATTGCTAAT TTATTATGTT CACAATTTGA ATTAAAACAA
GTGAAAAAAA GCTATTTGGC GATAGTTCGT GGTTATTTGA GCGATGCTCA ACGAATTGAT
TATCCGCTTA AAGTGCAACT GGACAAAATT GCAGATAAAT TTAGTCGAAA AGAAGAACTG
CAAGATGCAA TAACGGATTA TTATGGTTTA AAAACCGTTG AAATGCCTTA TGGCGTAGGG
CGTTATAGCT CTTCCCGCTA TTCACTTGTA CGTTTAATGC CGCATACGGG ACGTAAGCAT
CAATTACGTC GCCATTTAAA GCATATTTTT CATCCTATTT TGGGTGATAC TCAATATGGT
GATTTACATC AAAATCGGGC TTTCAGTCAA AATCTTGGTG TAAGCAGGTT AATGTTACAT
GCTGAAAAAC TTTGTTTTCA ACATCCGGTA ACTAATGAAA CAATAGAAAT TGTTGCTGAT
TTAGATGAGC AATGGAAATT GTTATTCAAA ATATTTAATT GGTAA
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| Protein sequence | MDILYQDEFL VVVNKPAGML VHRSWLDRHE TQFVMQTLRD QIGQHVFPIH RLDRPTSGVL
LFALNAGIAN LLCSQFELKQ VKKSYLAIVR GYLSDAQRID YPLKVQLDKI ADKFSRKEEL
QDAITDYYGL KTVEMPYGVG RYSSSRYSLV RLMPHTGRKH QLRRHLKHIF HPILGDTQYG
DLHQNRAFSQ NLGVSRLMLH AEKLCFQHPV TNETIEIVAD LDEQWKLLFK IFNW
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