Gene HS_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0841 
SymbolsohB 
ID4240333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp917847 
End bp918890 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content35% 
IMG OID638104396 
Productputative periplasmic protease 
Protein accessionYP_719051 
Protein GI113460984 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0227554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGGTT ATGGCTTGTT TATTTTAGAA ATACTCACAA TTTTATTAAT TGTTGCAGGG 
ATAGTGATGA TGATTATGAC ACTGAAAGAA CGTAAATCAC ATCAAGTCGG AGAGTTGGTT
ATTACAGATT TATCACGAGA ATATGAAAAT AACAGTAAAA AATTGCGTGA TTTTTACCTG
AGTGACGATG CGTTAAAACA ACGTGAAAAA GAGCAGAAAA AAGCCGATAA ACTTAAAGCA
AAAGAAGAAA AAGCCCAACG TAAAAAAGGG GAAACGTTAG CAGAAAAAAG AAAACCACAC
CTTTTTGTAT TGCATTTTAA AGGTGATATT TCTGCTTCAG AAACCACCGC ACTTCGAGAA
GAAATTAGTG CGATTATTGC GGTTGCAAAA GAAGATGACG AGGTTTTATT ACGCTTAGAA
AGTCCCGGTG GAGTTGTGCA TGGCTATGGA TTGGCTGCTT CTCAATTAGC TCGTTTAAAA
CAACGCAATA TTAAGCTAAC TGTAGCAGTG GACAAAGTTG CTGCAAGCGG AGGGTATATG
ATGGCTTGTG TTGCAGATAA AATTATTTCT GCTCCTTTTG CCATCATTGG ATCTATTGGT
GTTGTTGCTC AAATTCCCAA TATTCATCGT TTATTAAAAA AACATGATAT AGACGTTGAT
GTAATGACTG CTGGTGAATA TAAACGCACA ATGACCATTT TGGGTGAAAA TACAGAAAAA
GGAAAAGCAA AATTTCAACA AGATCTAGAA GACACTCATT TATTGTTTAA ACAATTCGTT
ACACAAAACA GACCGCACTT GGATATTGAT AAAATTGCAA CAGGTGAACA TTGGTTCGGC
AAACAAGCAT TAGCGTTACA TTTAGTTGAT GAAATTGCGA CGAGTGATGA TTTATTGTTA
CAAGCAATCA AAGGTAAAAC AGTGCTTTCG GTAAAATATA TGATGAAAAA ATCACTCATT
CAAAAATTAG GCAAACAAGC AGAAGAAAGT GCTAATAATG TGTTGTTACG ATTGCTGAAA
CGTGATGAGA GTACTTTGAT ATAA
 
Protein sequence
MIGYGLFILE ILTILLIVAG IVMMIMTLKE RKSHQVGELV ITDLSREYEN NSKKLRDFYL 
SDDALKQREK EQKKADKLKA KEEKAQRKKG ETLAEKRKPH LFVLHFKGDI SASETTALRE
EISAIIAVAK EDDEVLLRLE SPGGVVHGYG LAASQLARLK QRNIKLTVAV DKVAASGGYM
MACVADKIIS APFAIIGSIG VVAQIPNIHR LLKKHDIDVD VMTAGEYKRT MTILGENTEK
GKAKFQQDLE DTHLLFKQFV TQNRPHLDID KIATGEHWFG KQALALHLVD EIATSDDLLL
QAIKGKTVLS VKYMMKKSLI QKLGKQAEES ANNVLLRLLK RDESTLI