Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0838 |
Symbol | aspC |
ID | 4240330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 914522 |
End bp | 915712 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638104393 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_719048 |
Protein GI | 113460981 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.61366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAGA ACATTAATGC TGCACCCGCT GATCCAATTT TAGGTTTAGG TGAGGCTTTT AAATCTGAAA CACGTGCCAA TAAAATTAAC TTGGGTATTG GGGTCTATAA AGATGCTAAT GGTAACACCC CCATTATGAA AGCTGTTAAA GAAGCTGAAA ATCGTCTATT TGAATTAGAA ACCACTAAAA ACTATTTAAC TATTGATGGT ATTGCAGAAT TTAATTCATA CACTAAAGAA TTATTATTTG GTACAAATTC TAAAATTATT AAACAAGGAC GTGCTAAAAC AGTACAAAGT TTAGGAGGAA CTGGTGCGTT ACGTATTGCT GCCGAATTTA TCAAACGTCA AACCACATCT CAAAACGTTT GGATTAGTTC ACCAACTTGG CCAAACCATA ATGCTATTTT CAACGCTGTA GGTATGACAA TCCGTGAATA TCGTTACTAC GATGCAGAGA AAAAAGCTTT AGATTGGGAT AATTTAATTG CTGACTTAAG CAATGCCAGT GAAGGTGATG TGGTGTTATT ACATGGTTGT TGTCATAACC CAACGGGTAT TGATCCAACC CCTGAGCAAT GGAAAATACT AGCAGAAATG TCAGAAAAAA ATGGTTGGTT ACCGCTCTTT GATTTTGCCT ATCAAGGTCT TGCTAACGGG TTAGAAGAAG ATGCTATTGG TTTGCGAACT TTTGCAGAAA ATCATAAAGA ATTATTAGTC GCAAGTTCTT ATTCCAAAAA CTTTGGTTTA TACAATGAAC GTGTTGGTGC CTTTACTTTA GTAGCAGAAA CAGAAGAAAT TTCAGCAATA GCATTAACAC AAGTGAAATC AATTATTCGT ACTCTCTACT CTAACCCAGC TTCTCATGGT GCTACAGCTG TTTCTATCAT TTTAGGTGAT GACCTATTAC GTCAACAATG GGAATCCGAA TTAACCGAAA TGCGTAATCG CATTAAACGT ATGCGTTATC AATTTGTTGA ATTGCTAAAA GAATATGGTG CCAAGCAAGA CTTTAACTTC ATTATTGAAC AAAATGGTAT GTTCTCTTTT AGTGGTCTAA ATGCAGAACA GGTGGATCGC TTAAAAGAAG AATTTGCCAT TTATGCTGTG CGTTCAGGAC GTATTAATTT AGCCGGTGTA ACTGAAGATA ATATTCGTTA TTTATGTGAA AGTATTGTCA AGGTGCTTTA A
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Protein sequence | MFENINAAPA DPILGLGEAF KSETRANKIN LGIGVYKDAN GNTPIMKAVK EAENRLFELE TTKNYLTIDG IAEFNSYTKE LLFGTNSKII KQGRAKTVQS LGGTGALRIA AEFIKRQTTS QNVWISSPTW PNHNAIFNAV GMTIREYRYY DAEKKALDWD NLIADLSNAS EGDVVLLHGC CHNPTGIDPT PEQWKILAEM SEKNGWLPLF DFAYQGLANG LEEDAIGLRT FAENHKELLV ASSYSKNFGL YNERVGAFTL VAETEEISAI ALTQVKSIIR TLYSNPASHG ATAVSIILGD DLLRQQWESE LTEMRNRIKR MRYQFVELLK EYGAKQDFNF IIEQNGMFSF SGLNAEQVDR LKEEFAIYAV RSGRINLAGV TEDNIRYLCE SIVKVL
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