Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0831 |
Symbol | nusB |
ID | 4240323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 909291 |
End bp | 909725 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638104386 |
Product | transcription antitermination protein NusB |
Protein accession | YP_719041 |
Protein GI | 113460974 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000197838 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAA AAGTAAAAAA ACTATCCCCA CGTCGTCGAG CAAGGGAATG TGCGGTACAG ACTTTGTATT CTTGGGCTAT TTCAAAAAAT GCACCTGAAG AAATAGAATT AAATTTCATT GTGGATCAAG ATAATGAAAT GAAGGGCGTG GATATGCCAT ATTTCAGAAA ATTGTTTCGT CAAACAGTTG ACCATGTTGA AATTGTTGAT AGCATAATGG CACCTTACTT AGATCGTGAT AATGTTGAGT TAGATCCTAT TGAATGTGCA ATTCTACGTT TAGCTGTTTA TGAATTGAAA TTTGAATTGG ATGTACCTTA TAAAGTGGTG ATCAATGAAG CTATTGAGGT TGCTAAAGTA TTTGGTGCAG AAGAAAGCCA TAAATATATT AATGGTGTTT TAGATAAAAT TGCACCTGCA CTTTCTCGTA AATAG
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Protein sequence | MTEKVKKLSP RRRARECAVQ TLYSWAISKN APEEIELNFI VDQDNEMKGV DMPYFRKLFR QTVDHVEIVD SIMAPYLDRD NVELDPIECA ILRLAVYELK FELDVPYKVV INEAIEVAKV FGAEESHKYI NGVLDKIAPA LSRK
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