Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0814 |
Symbol | lolA |
ID | 4240305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 888919 |
End bp | 889533 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638104368 |
Product | outer-membrane lipoprotein carrier protein |
Protein accession | YP_719024 |
Protein GI | 113460957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000179338 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ATCTAAATTT AACCGCACTT TTATTAGTAG GTATCAGTAA TGTAACTTGG GCAAATGCGG TTAATGAGTT ACAAAATCGT TTAAATAAAA TTGATGTGTT AAGTGCTGAC TATACACAAC AAGTGACTGA TGCACAGGGA AAAAAAATAC AGCAAGGTAG TGGAAAAATA CAACTCAAAC GTCCTAATTT ATTTCGTATG GACAATGAAA CACCTCAAGA AAGTCAAATT ATTGCAGATG GAAAAACATT ATGGTTCTAC GATCCTTTTG TTGAGCAAGT AACAGCAAAT TGGGTTGAAG ATACCTTAAG CGATACCCCC TTTGTTTTGC TAACAAGTAA TAATCCAAGT CATTGGCAAC AATATATTGT TGAGCAAAAA TCCGATACGT TTATTATTAA ACCCAAATCT AAGAAAAGTA CCATCAAGCA ATTTAATATT CGAATTGAAA AAGATGGTGT ATTAAAAAAT TTTAGTACAA TAGAGAACGA TGGGCAAAGT AACTTGTATA TTCTGCGTAA GATTACCAAT CCAGCCTTAA ATGATGCAAT ATTCACATTT ACCTTGCCTA AGGGCGTTGA ATTTGACGAT CAACGTAAAA AATAA
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Protein sequence | MKKYLNLTAL LLVGISNVTW ANAVNELQNR LNKIDVLSAD YTQQVTDAQG KKIQQGSGKI QLKRPNLFRM DNETPQESQI IADGKTLWFY DPFVEQVTAN WVEDTLSDTP FVLLTSNNPS HWQQYIVEQK SDTFIIKPKS KKSTIKQFNI RIEKDGVLKN FSTIENDGQS NLYILRKITN PALNDAIFTF TLPKGVEFDD QRKK
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