Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0758 |
Symbol | |
ID | 4240249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 812399 |
End bp | 813187 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638104312 |
Product | IclR family transcriptional regulator |
Protein accession | YP_718968 |
Protein GI | 113460901 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00765311 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAG AGAATAAAAA TAAACAAGCT AGCAGCAACC AAAGTTTAAT TAAGGGTTTA TTACTAATTG ATATTTTGAG CAATTTCCCT AATGGTTGTC CATTAGCTAA ACTATCTGAA TTATCTAATC TAAATAAAAG TACAACATAT CGTATGCTAC AAACACTACA AACCTGTGGT TATGTCAAAC CTACCAATAC AATTGGTACA TATCGTTTAA CAATGAAGTG TTTAACGATT GGGCAAAAAA CCTTGAGTTC ACTTAATATA TTAAATATTA CATCCCCTTA CTTAGAGCAA CTTAATTTGA ATACAGGTGA AACAGTCAAT TTATCTATGC GTGATCATCA TCATGCTGTA ATGATTTATA AACTTGAACC AACAACAGGT ATGATGCGTA CACGAGCGTA TATTGGCCAG CGTTTAGAAC TTTATTGTTC AGCTATGGGA AAAATTTTTA TAGCATACGA AAAAAGACAC ATTCTAGATG ATTATTGGGA GAAAAATCAA ACGAATATTA CAAAATTAAC AGCTAATACA ATTGTAACAC TGAGTGCTAT GGAGCTGGAG TTAAATAAGA TTCGAGAATT AGGGTATGCC GTAGATAATG AAGAAAATGA AACAGGCGTA ACTTGTTTAG CTTGCCCAAT ATTTGACATC AATAGCAATG TAATCTACTC CGTATCAATT TCTCTATCAA CTGCACGTTT AAACCAAATC GGCAAAGATA TATTGCTCAT GCAGCTCAAA CAAACAGCAC AATCCATTTC AAAAGAGCTG GGGGCGTAA
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Protein sequence | MKEENKNKQA SSNQSLIKGL LLIDILSNFP NGCPLAKLSE LSNLNKSTTY RMLQTLQTCG YVKPTNTIGT YRLTMKCLTI GQKTLSSLNI LNITSPYLEQ LNLNTGETVN LSMRDHHHAV MIYKLEPTTG MMRTRAYIGQ RLELYCSAMG KIFIAYEKRH ILDDYWEKNQ TNITKLTANT IVTLSAMELE LNKIRELGYA VDNEENETGV TCLACPIFDI NSNVIYSVSI SLSTARLNQI GKDILLMQLK QTAQSISKEL GA
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