| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0750 |
|---|
| Symbol | fucP |
|---|
| ID | 4240241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 804726 |
|---|
| End bp | 806000 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638104304 |
|---|
| Product | fucose permease |
|---|
| Protein accession | YP_718960 |
|---|
| Protein GI | 113460893 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0738] Fucose permease |
|---|
| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000880356 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATG GTTATCTCAA TAAAACACCT ATTTTCCAAT TTATTTTGCT TTCTTGTTTA
TTCCCACTTT GGGGAGCAGC AGCCAGCTTA AATGATATTT TAATCACTCA GTTTAAAAGT
GTATTTACGC TGAGTGATTT TGCCAGTGCT TTAGTACAAA GTGCATTTTA TGGAGGATAT
TTTTTAATTG CGATACCTGC ATCATTGGTG ATCAAAAAAA CCAGCTATAA AATTGCTATT
TTAATTGGCT TAATGCTATA TATCGGTGGT TGTTCGCTAT TCTATCCAGC CTCGCATATG
GCAACATACA CAATGTTTTT AGTGGCTATT TTCTCTATTG CGATTGGGTT AAGTTTCTTG
GAAACCTCTG CGAATACTTA TAGTTCAATG ATTGGACATA AAGATCATGC AACGTTGAGA
TTAAATATAA GCCAGACTTT CTATCCAGTT GGTGCTATTT CAGGTATTTT ATTAGGTAAA
TACCTCATTT TCCAAGAAGG TGCCAGTCTT GAAGAACGAA TGGTAGGAAT GACACCGGAA
CAGTTGCATT CATTTAAATT ATCAATGTTA GAACATACGT TGTCACCATA TAAATACTTA
ATCTTCATAT TGATTGCGGT GACTTTTTTA TTCGTAATTA CCTCTTTTCC TAAATGTAAA
GCAGTTACAC AAACAGGTAA ATCAGAAGTG AAATTTACCG ATACGCTAAA ATATCTAGCG
AGTAATACAA AATTTAAAAA GGGAATTGTT GCTCAATTTC TCTACGTTGG TATGCAAGTT
GCCGTATGGT CATTTACTAT TCGTTTGGCA CTCAATTTAA GTGATATGAA TGAACGTGAA
GCCTCAAATT TTATGGTTTA TAGCTTTATT GGATTCTTTA TTGGCAAATT TGTCGCTAAT
TTCTTAATGA CTAAATTTAA GTCAGATCTC GTTTTACTTT GGTATTCCAT TTTAGGTGTG
ATCACTCTAG CTTATACCTC TTTTGTTCAT GATTTTTCTG CTGTTTATGC GGCTATTTTC
GCCAGTTTGT TGTTTGGTCC TTGCTGGGCA ACAATCTATG CCTCAGTACT GGATACTGTT
AATCAAGAGC ATAGAGAAGT GGGTGGGGCT GTTGTCGTCA TGTCTATTAT CGGTGCCGCT
GTTGTTCCTG CAATTCACGG TTATGTCTCA GATACATTAG GATCTCTTCA ACTTGCATTT
ATTGTACCTT TATTCTGTTT TGCTTATGTT GGCTATTATT TTTATGGAAA ATTAAAAGAA
AACAAGGAGA AATAG
|
|---|
| Protein sequence | MPDGYLNKTP IFQFILLSCL FPLWGAAASL NDILITQFKS VFTLSDFASA LVQSAFYGGY
FLIAIPASLV IKKTSYKIAI LIGLMLYIGG CSLFYPASHM ATYTMFLVAI FSIAIGLSFL
ETSANTYSSM IGHKDHATLR LNISQTFYPV GAISGILLGK YLIFQEGASL EERMVGMTPE
QLHSFKLSML EHTLSPYKYL IFILIAVTFL FVITSFPKCK AVTQTGKSEV KFTDTLKYLA
SNTKFKKGIV AQFLYVGMQV AVWSFTIRLA LNLSDMNERE ASNFMVYSFI GFFIGKFVAN
FLMTKFKSDL VLLWYSILGV ITLAYTSFVH DFSAVYAAIF ASLLFGPCWA TIYASVLDTV
NQEHREVGGA VVVMSIIGAA VVPAIHGYVS DTLGSLQLAF IVPLFCFAYV GYYFYGKLKE
NKEK
|
|---|
| |