| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0696 |
|---|
| Symbol | |
|---|
| ID | 4240184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 739544 |
|---|
| End bp | 740413 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638104248 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_718908 |
|---|
| Protein GI | 113460841 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000925251 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA CGAGCGGTAA TATATTGGAT ACCATTGGTG CTTTGTATGA TAGCCTAACA
AAAACAGAGA AACGGATTGC CACAACGGTT CTATCTTCTC CAGAGTTGTT GGGACAAAAC
TCTTTAGCGG AAATTGCACA ACAATTCGAT GTCGGAGAAG CAACCTTTAT TCGTTTTTGC
CGAACATTAG GTTTTAAAGG CTTTACTGAT TTCAAATTAC AACTTTCGAT TGAGTTGGCT
ACAAAAGATC GACAATCTAA TTCTCTACTG GAAACGGATA TATCAAAATT TGATGGAACA
AGCCAAATCG CAGAAAAATT GCAAAATGTC ATTCATAATG TCATTTCAGA AACCGTTAAT
TTGCTGGATT TTGCTCAACT CGAAAAAGTT GTTGAATTAA TGCGTGTATC AAAACGAATC
TTCCTGTTTG GTGTCGGTTC ATCAGGCTTA ACTGCAGAAG AAGCAAAAAA TAAATTAATG
CGTATTGGAT TACACGTTGA TGCAACAAGC AATAATCATT TTATGTATAT GCAAGCTGCA
TTAATGAACT CAAGTGATAT TGTTATCGGT ATAAGTCATT CAGGCTATTC CAAAGAAACC
GTTCAAGCAT TGAATATTGC CAAGAAAAAC GGTGCTGTTA CCGTCGCTCT TACACATAAT
TTACGCTCCC CTATCACTAT GGTTTCTGAT TATGTATTAA TCAACGGTAA TCGACAAGGG
CAGCTACAAG GCGATTCTAT CGGTACAAAA ATAGCTCAAC TTTTTGTATT GGACTTAATT
TACACCTTGA TTGTTCAAGC GGAAGAAGAA AGTGCGGTAC AAACTAAACA AAAAACAGTT
AATGTGATTT TAGAACAACG TATTAAATAA
|
|---|
| Protein sequence | MAATSGNILD TIGALYDSLT KTEKRIATTV LSSPELLGQN SLAEIAQQFD VGEATFIRFC
RTLGFKGFTD FKLQLSIELA TKDRQSNSLL ETDISKFDGT SQIAEKLQNV IHNVISETVN
LLDFAQLEKV VELMRVSKRI FLFGVGSSGL TAEEAKNKLM RIGLHVDATS NNHFMYMQAA
LMNSSDIVIG ISHSGYSKET VQALNIAKKN GAVTVALTHN LRSPITMVSD YVLINGNRQG
QLQGDSIGTK IAQLFVLDLI YTLIVQAEEE SAVQTKQKTV NVILEQRIK
|
|---|
| |