Gene HS_0671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0671 
SymboltyrA 
ID4240159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp718191 
End bp719315 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content35% 
IMG OID638104223 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_718883 
Protein GI113460816 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.106766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTTT TAAAAAATTT AAGAACAGAA ATTGATTGCT TAGATCGTGA ATTACTACAC 
CTTTTTTCTC AACGCTTAGA ATTAGTCAGA AAAGTAGGCA AAGTGAAACA TCAATATGGA
TTACCGATTT ATGTACCTGA ACGTGAAAAT GAAATGTTAC AGGCTCGTCG CAATGAAGCG
GAAAAGTTAG GTGTTTCACC GGATTTAATT GAAGATGTTT TGCGTCGTTT GATGCGGGAA
TCTTATACTA GAGAAAATCA ATACGGTTTT AAAACAGCAA ATCCTGAAAT AAAAAAAATC
GTCATTGTTG GAGGAAAGGG AAAATTAGGG GCATTATTTG CTCGTTATTT GTCTTCTTCT
GGTTATCAAA TTGCTGTCTT AGAGAAACAG GATTGGCAAA GTGCGGATAA AATTTTACAA
AATGCAAATG TAGTTATTGT TTGTGTCCCA ATTGCACAAA CTTTAAATGT GATTGACCGT
CTGAAGCCTT ATCTAACCGA AAATATGCTA TTAACAGATT TAACCTCAGT CAAACGTCAA
CCGTTGGAAA AAATGTTACA AGTGCATCAA GGTGCGGTAT TGGGATTACA TCCAATGTTT
GGTCCGGATA TTACCAATAT GGCAAAGCAA GTTGTAGTAC GTTGTGACGG TCGCTACCCT
GAAAAATACC AATGGTTTTT GGAACAAATT CAAATGTGGG GAGCGAAAAT TTATCAAGTT
GATGCAACCG AACATGATAA AAGTATGACG TATGTACAAG CCTTACGTCA TTTTTCAACC
TTTGCAAATG GTTTGCATTT ATCAAAACAA CCTATTGAGT TGGCACAATT GCTTGCCCTA
TCTTCACCCA TTTATCGTCT TGAATTAGCC ATGATCGGAC GTTTATTTGC TCAAGATGCG
GAACTTTATG CAGATATTAT TATGGACAAA TCGGAGAATT TGGAAGTGAT TAAGAGTCTA
AAACAAAGCT ATGAAGAAAG TCTAAATTTC TTTGAACATA ATAATAAGCA GGGATTTATT
GACTGTTTTA ATCAAGTGCG GGAATGGTTT GGTGAGTATT CAGAGCAATT TTTGAAAGAA
AGTCGGCAAT TATTACAACA GGCAAATGAT TACAAAAGTA TTTGA
 
Protein sequence
MDVLKNLRTE IDCLDRELLH LFSQRLELVR KVGKVKHQYG LPIYVPEREN EMLQARRNEA 
EKLGVSPDLI EDVLRRLMRE SYTRENQYGF KTANPEIKKI VIVGGKGKLG ALFARYLSSS
GYQIAVLEKQ DWQSADKILQ NANVVIVCVP IAQTLNVIDR LKPYLTENML LTDLTSVKRQ
PLEKMLQVHQ GAVLGLHPMF GPDITNMAKQ VVVRCDGRYP EKYQWFLEQI QMWGAKIYQV
DATEHDKSMT YVQALRHFST FANGLHLSKQ PIELAQLLAL SSPIYRLELA MIGRLFAQDA
ELYADIIMDK SENLEVIKSL KQSYEESLNF FEHNNKQGFI DCFNQVREWF GEYSEQFLKE
SRQLLQQAND YKSI