Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0655 |
Symbol | rimK |
ID | 4240143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 702536 |
End bp | 703435 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104207 |
Product | SSU ribosomal protein S6P modification protein |
Protein accession | YP_718867 |
Protein GI | 113460800 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.922088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAC TAATGTTATG TCGAGAACCT CGCCTTTACA GTTGTCAGCG TTTAAAAGAA AGTGCGGAAG ATAATGGGCA TCAGATAGAT ATTTTGGATC CTAATCGTTG CTTATTAAAA CTCTCGAAAA ATGCACCGCA CTTTGAGTTG TATTATCAAG TGAATAGTAA AAGCGAGCCG TATTTATTAC CGGATTATGA TGCGATTATT CCTCGTTTTG GTTCTACAAG CACAAGAATG GGGTGTGCCG TGTTACGACA TTTTCGTACA AAAAATATAT TTTGTTTAAA TGATGATGTT GCGTTTTTAA AAGCCAGAGA TAAATGGCTT AGTTTACAGT TATTGACTGA ACAAGGTATT GCTGTCCCTA ATTCAGCATT GTCAGGTGCA GAATTTTCTG CCACTCAAGC CATTTTGCAA ATTCAATCGC CGACGATTTT GAAAACGTTA CACGGATCAC AAGGAATAGG CGTTATTTTG GCAGAAAATC GTAAAAGTGC GGTGAGTATT ATGGAAACTT TAACTCAAGC AGACGTACCG TTATTAATGC AGGATTTTAT TCAGGAAGCA CAAGGAACGG ATATTCGTTG TTTTGTTATT GGTGATAAAG TTGTTGCTAC AATGCAACGT ATTGGACAAG AAGATGAATT TCGTGCCAAT TTTCATCGAG GGGGAAGTGC AGAGAAAATT CAGTTAACCG AACAAGAAAA AGTACTGGCT TTAAAAGCAA CGAAATGTTT AGGGCTAGAT GTTGCAGGTG TCGATTTGAT CCGTTCTAAA CAAGGGTTGT TAGTGCTAGA AGTCAATGCC AGTCCCGGAT TGGAAATGAT CGAAAAAACC AGTGGAATTG ATATTGCCTT GCAAATGATA GTTCACATTG AAAAGCAGTT TAAGAGATAA
|
Protein sequence | MKLLMLCREP RLYSCQRLKE SAEDNGHQID ILDPNRCLLK LSKNAPHFEL YYQVNSKSEP YLLPDYDAII PRFGSTSTRM GCAVLRHFRT KNIFCLNDDV AFLKARDKWL SLQLLTEQGI AVPNSALSGA EFSATQAILQ IQSPTILKTL HGSQGIGVIL AENRKSAVSI METLTQADVP LLMQDFIQEA QGTDIRCFVI GDKVVATMQR IGQEDEFRAN FHRGGSAEKI QLTEQEKVLA LKATKCLGLD VAGVDLIRSK QGLLVLEVNA SPGLEMIEKT SGIDIALQMI VHIEKQFKR
|
| |