Gene HS_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0655 
SymbolrimK 
ID4240143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp702536 
End bp703435 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content38% 
IMG OID638104207 
ProductSSU ribosomal protein S6P modification protein 
Protein accessionYP_718867 
Protein GI113460800 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.922088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TAATGTTATG TCGAGAACCT CGCCTTTACA GTTGTCAGCG TTTAAAAGAA 
AGTGCGGAAG ATAATGGGCA TCAGATAGAT ATTTTGGATC CTAATCGTTG CTTATTAAAA
CTCTCGAAAA ATGCACCGCA CTTTGAGTTG TATTATCAAG TGAATAGTAA AAGCGAGCCG
TATTTATTAC CGGATTATGA TGCGATTATT CCTCGTTTTG GTTCTACAAG CACAAGAATG
GGGTGTGCCG TGTTACGACA TTTTCGTACA AAAAATATAT TTTGTTTAAA TGATGATGTT
GCGTTTTTAA AAGCCAGAGA TAAATGGCTT AGTTTACAGT TATTGACTGA ACAAGGTATT
GCTGTCCCTA ATTCAGCATT GTCAGGTGCA GAATTTTCTG CCACTCAAGC CATTTTGCAA
ATTCAATCGC CGACGATTTT GAAAACGTTA CACGGATCAC AAGGAATAGG CGTTATTTTG
GCAGAAAATC GTAAAAGTGC GGTGAGTATT ATGGAAACTT TAACTCAAGC AGACGTACCG
TTATTAATGC AGGATTTTAT TCAGGAAGCA CAAGGAACGG ATATTCGTTG TTTTGTTATT
GGTGATAAAG TTGTTGCTAC AATGCAACGT ATTGGACAAG AAGATGAATT TCGTGCCAAT
TTTCATCGAG GGGGAAGTGC AGAGAAAATT CAGTTAACCG AACAAGAAAA AGTACTGGCT
TTAAAAGCAA CGAAATGTTT AGGGCTAGAT GTTGCAGGTG TCGATTTGAT CCGTTCTAAA
CAAGGGTTGT TAGTGCTAGA AGTCAATGCC AGTCCCGGAT TGGAAATGAT CGAAAAAACC
AGTGGAATTG ATATTGCCTT GCAAATGATA GTTCACATTG AAAAGCAGTT TAAGAGATAA
 
Protein sequence
MKLLMLCREP RLYSCQRLKE SAEDNGHQID ILDPNRCLLK LSKNAPHFEL YYQVNSKSEP 
YLLPDYDAII PRFGSTSTRM GCAVLRHFRT KNIFCLNDDV AFLKARDKWL SLQLLTEQGI
AVPNSALSGA EFSATQAILQ IQSPTILKTL HGSQGIGVIL AENRKSAVSI METLTQADVP
LLMQDFIQEA QGTDIRCFVI GDKVVATMQR IGQEDEFRAN FHRGGSAEKI QLTEQEKVLA
LKATKCLGLD VAGVDLIRSK QGLLVLEVNA SPGLEMIEKT SGIDIALQMI VHIEKQFKR