Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0643 |
Symbol | afuA |
ID | 4240131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 690316 |
End bp | 691356 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638104195 |
Product | Fe3+ ABC transporter, iron-binding protein |
Protein accession | YP_718855 |
Protein GI | 113460788 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000121089 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATGA AAAAAATATC TTGGGCAATA TCAACCGCAC TTTTTGCAAC AGGATTAATG GTAACGACTC AAGTTAATGC AAAGGGGCGT TTAGTTGTCT ACTGCAGTGC AACCAATGAG ATGTGTGAAG CTGAAACCAA AGCTTTTGGT GAGAAATATA ATGTAAAAAC CTCTTTCATT CGCAATGGTT CGGGCAGTAC TTTAGCAAAA ATTGAAGCTG AAAAAAATAA TCCTCAAGCC GATGTATGGT ATGGAGGTAC GTTTGATCCT CAAGCACAAG CAGCTGAAAT GGGATTATTA ACGCCGTATC GTTCAGTGCA TATTAATCAT ATTGTAGAAC GTTTCCAAGA TCCGGCTAAA GTGAAAGGTA ATTATACCTC TGCTATCTAT ATGGGAATTT TAGGTTTTGG TGTTAATACG GAACGATTGA AAAAGTTAGG TATCACTGAA ATTCCAAAAT GCTGGAAAGA CTTAACCGAT CCTCGTCTTA AGGGAGAAAT CCAAATCGCT GACCCACAAA GTTCAGGGAC TGCCTATACA GCGATTGCAA CTTTTATTCA AATTTGGGGA GAAGATAAAG CTTTTGATTA TTTTAAACAG TTACACCCAA ATATTTCACA GTACACAAAA TCGGGAATTA CCCCCTCTAA TAATACCGCT CGTGGTGAAA CAGCTGTAGG AATAGGTTTC TTACATGATT ATGCATTGCA AAAACAACAA GGTGCACCGA TAGAAATGAT TGTACCTTGT GAAGGAACAG GGTATGAGTT AGGAGGTGTC AGTATTATTA AAGGTGCAAG AAACTTAGAA AATGCTAAAT TGTTTGTAGA TTGGGCGTTA TCAAAAGAAG GGCAAGAATT AGCTTGGAAA AAAGGAAAAT CATTCCAAAC ATTAACTAAC ACGACAGCAG AACAATCACC GGTAGCTTTT GATCCTAAGA AATTAAAACT TATTAATTAC AATTTTGAAA AATATGGTGA CGTTGCAGAA CGTAAACGTT TAATTACAAA ATGGATTAAT GAAGTTAAAT TGGCTAAATA A
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Protein sequence | MKMKKISWAI STALFATGLM VTTQVNAKGR LVVYCSATNE MCEAETKAFG EKYNVKTSFI RNGSGSTLAK IEAEKNNPQA DVWYGGTFDP QAQAAEMGLL TPYRSVHINH IVERFQDPAK VKGNYTSAIY MGILGFGVNT ERLKKLGITE IPKCWKDLTD PRLKGEIQIA DPQSSGTAYT AIATFIQIWG EDKAFDYFKQ LHPNISQYTK SGITPSNNTA RGETAVGIGF LHDYALQKQQ GAPIEMIVPC EGTGYELGGV SIIKGARNLE NAKLFVDWAL SKEGQELAWK KGKSFQTLTN TTAEQSPVAF DPKKLKLINY NFEKYGDVAE RKRLITKWIN EVKLAK
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