Gene HS_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0609 
SymbolmanX 
ID4240095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand- 
Start bp651424 
End bp652395 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content39% 
IMG OID638104161 
Productprotein-N(pi)-phosphohistidine-sugar phosphotransferase (phosphotransferase system mannose/fructose-specific IIA component) 
Protein accessionYP_718821 
Protein GI113460754 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA
[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000226836 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATTG CGATTATCAT AGCAACGCAT GGTGTTGCGG CTGAACAATT GCTTAAAACA 
ACAGAAATGT TGATTGGTGA GCAAGAGAAT GTTGCAACTA TTGATTTTGT TTCAGGCGAA 
AATGCTGAAA CGATTATGAC GAAGTATCAA GAAAAATTAA GTACAACATT AGCACATTGC 
GATGAAGTCC TGTTTTTAGT GGATACTTGG GGCGGCAGTC CGTTTAATGC GGCAAATCGT 
GTAATTGGTG ATAACACTAA TATGGATATT GTAACCGGTG TAAATGTGCC TATGTTAGTG 
GAAACTTTTA TGGCACGTGA CGATAACCCT AGCTTACAAG AATTAGTGAG CATTGCGTTA 
GAAACCGGCC GTGCTGGTGT TCGTGCTTTG AAATATGAAG AAAAATCGGC TGAAACTACC 
GCACTCTCAC AACCAGTCCC TGAACAACCT CAAATCGCAG TCAAACAACA AGAAGGCAAT 
CTCATTGTAG GTTTAGCTCG CATTGATGAC CGTTTAATCC ATGGACAAGT CGCCACTCGC 
TGGACAAAAG AAAGTCGAGT AACACGTATT GTTGTAGTCA ATGATGATGT TGCCAAAGAT 
CAAGTTCGCT CAACCATGCT GAAAAGCGTT GCACCTCCAG GAGTTACCGC ACATGTTGTG 
AATATAGAAA AAATGATCCG TGTATATAAC AATCCTGAAT ATGCAAATGA ACGTATGATG 
CTATTATTCA CTAATCCTAC CGATGTTTTA AGATTGTTAG AAGCCGGTGT TGATATGAAA 
TCAATTAATG TCGGTGGTAT GGCATATAAA GACGGTAAAA AAATGATTAC GAGTGCGGTG 
GCTGTTGATG ATAAAGATAT TGCCGCATTC AAAGCCATTG ATGCGATGGG CATTGAATTA 
GATGTTCGTA AAGTATCTAA CGACAGTCGT CAATATATGA TGGATTTACT CAAAAAAAAT 
AATTTAATTT AA
 
Protein sequence
MSIAIIIATH GVAAEQLLKT TEMLIGEQEN VATIDFVSGE NAETIMTKYQ EKLSTTLAHC 
DEVLFLVDTW GGSPFNAANR VIGDNTNMDI VTGVNVPMLV ETFMARDDNP SLQELVSIAL 
ETGRAGVRAL KYEEKSAETT ALSQPVPEQP QIAVKQQEGN LIVGLARIDD RLIHGQVATR 
WTKESRVTRI VVVNDDVAKD QVRSTMLKSV APPGVTAHVV NIEKMIRVYN NPEYANERMM 
LLFTNPTDVL RLLEAGVDMK SINVGGMAYK DGKKMITSAV AVDDKDIAAF KAIDAMGIEL 
DVRKVSNDSR QYMMDLLKKN NLI