| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0582 |
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| Symbol | hpuB |
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| ID | 4240066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 616932 |
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| End bp | 619298 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638104132 |
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| Product | heme uptake protein |
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| Protein accession | YP_718794 |
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| Protein GI | 113460727 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01776] TonB-dependent lactoferrin and transferrin receptors
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000461965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTA ATAAAAATCG TCAGCAAACG TTACTGCGGT TTTCTGCTGT TACGTTGCCT
TTATTTTCAT TTAATGCAAT CGCTCAATTT AATGATTCTG CTACATTAGA TCAGATTGTT
GTTGAAACGC AACAAGTATC GGCTAAAACT TCAAGCACAA ATAGCCAACA AATCAGTCGA
GGTTTGGTAT GGAACGAACA GGATTTGGTC CGTTGGCAAA CAGGTGTTAC AGTCACTGAA
GGGGGGCGTG GCGGTGCCAA TGGTTATACT ATGCGTGGTG TAGAAAGCGA CCGTGTGGCG
ATGAGTGTTG ATGGAATAAG TGCGGTCGAA AGTTATATGC CTCGCTTTTA CTATATTAAA
GGATTTTATA ATGGTAATCG CAACAGCACG GAAATTGAAA ACTTAAGTAG TGTAGAATTT
AATAAAGGGG CGAATTCTTT AACACAAGGT AGCGGTGCGT TGGGCGGTAG CGTGTCGATG
CGAACAAAAA ATGTGCATGA TTTTGTAGAC TCGAATAAAA CTGTTGGATT TTATGCTAAA
ACTGCCTATA GCTCACGTAA TACGGAATAT CGCCAAGTGA TAGGGGGGGG GTTCAAGCAG
GGTAACGCCG AGGGATTGTT GCAATACACC TATCGCCATG CACATGAAAA CAAAAATTAT
TATAGTGGCA AACTAAAAGA CGTTGCGTAT TGTGGCATTT TACCAAGTGG AGACCAGCGA
GATATCTTTC CCCAATTATG TGGGCGTAGT CGTGTATTAC CTGATAATGT GGATTATCAC
AGCAGATCTT GGTTGGCAAA ATTAGGTTAT CACTTTACTC CACAACATTT TGTGCAAGTT
TTTTTTGAAA ATCTTGAGCA AAGCAGAAAA ATTTTAGAAA AAAGTTTTTA TGCTTCAAAT
CGTCAAGAAG CGGGCGATAT AACACCTTAT CAGCGATTTG GTCTTTCCTA TAATTATACC
CCTACGGAAA GCTGGCTAAA TAAATTTAGC GTACAATTAG CCCAACAAAA AGTCTCACAA
CAGGCTAATT CCAATCAATA TGGTGTTTCT CCGCAAGATT ATAATATTAT TACTGACAAG
CGTTTATATA AAACAGAACA GAAGCATCAT CAATTAGATG TTTCTTTTAT TGCCAATGAA
ATTGCCGGCA AGTTTGCTCA TCATCAATTA TCAGGAGGAT TGGGTTATCA TTGGGGTAAA
TTAGAAAATA GAAATCAAGA GTATGGTGCT TATTCAAGGA TAAAACAACG TGAATTCACT
ATTCAGCAAC CTGTTGCCCG TCAGGCTTGG TATGCCTATG TGCAGGATTT AATCAGTATT
AATCAAAAAT GGGGAGCAAA TGCGGGAATA CGCTTCGATC ACTATCGCTA TAAACCGACC
ACAAGTGCAT TAAAATACGA GTCCCCCAAT CAAAAAGTCG AAGTTTTACC CAAGAAACAA
TTTAGTGCGG TCAATTTTTC GCTTGGATTA AATTATTCGA TCACTGATTC CACGTTACTT
AGCTATGAAT TCAGCACAGG TTTTAAAGCA CCGAAAATAG AAGAAATGTA TTTTGATTTA
AAAGGAGAAG GTTCGAACCA TCATTTACCT AATATTAATT TGAAGCCTGA AAAAGCACAA
AATCATGAAC TGTCTCTTAC CACAGAAGGC GACAATTACC AATTAAACTT GTCTGTATTT
TATACAAAAT ATCGGGATTT TATTGATGCT GATACAAAGA CGGAAGTTAT AGACAATGGA
TATAAAAAAC ATGTTTATAG TCTAAGTAAA GTAATTTATC AACAGATAAA TATTGATAAA
GCCTATGTTA CCGGTCTTGA TTTCCATGCC CGTGCTAATG GGAAAATAAT TGGTTTATCC
AAATCTTGGT ACGCTATATT AAAGGCAAGC TATGCAAAAG GACGTAAAAA TAATGGCACA
GCGATGTTAC CAATCCAGCC TTTTAGCACG ACGTTGGGAT TAGGCTACCA AGCGGAGAAC
GACAAATGGA ATGTTCTCTT CAGCGGGCGA TATGTCAGTG CGAAAAAAGC TAAAGATGCT
ATTGATATTC CGGTCGCTTA CAGCTTAAAA CTAAAAGCTG ATAGAGGAAC AGGGAAAGTA
TCTGGTTTTG AACAACCCAA ACCTTATCGT TTTTTAAGCA GTTCTTATGT CGTTTTTGAT
TTAACCGCAC AATACCGCCT AAACTCCCAT TTCGCCTTAA ACGCAGGTAT CTTTAATTTA
TTTAATCGCA AGTACACCAC TTGGGATACG TTACGACAAA TTAAATATAA TGGTGCATTG
GGCGACGTAT ATAACAACGG AAAAGGGTTA GAACGCTTTA CTGCTGCCGG ACGTAATTTT
GCTTTATCAT TAGAAATGAA ATTTTAA
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| Protein sequence | MFFNKNRQQT LLRFSAVTLP LFSFNAIAQF NDSATLDQIV VETQQVSAKT SSTNSQQISR
GLVWNEQDLV RWQTGVTVTE GGRGGANGYT MRGVESDRVA MSVDGISAVE SYMPRFYYIK
GFYNGNRNST EIENLSSVEF NKGANSLTQG SGALGGSVSM RTKNVHDFVD SNKTVGFYAK
TAYSSRNTEY RQVIGGGFKQ GNAEGLLQYT YRHAHENKNY YSGKLKDVAY CGILPSGDQR
DIFPQLCGRS RVLPDNVDYH SRSWLAKLGY HFTPQHFVQV FFENLEQSRK ILEKSFYASN
RQEAGDITPY QRFGLSYNYT PTESWLNKFS VQLAQQKVSQ QANSNQYGVS PQDYNIITDK
RLYKTEQKHH QLDVSFIANE IAGKFAHHQL SGGLGYHWGK LENRNQEYGA YSRIKQREFT
IQQPVARQAW YAYVQDLISI NQKWGANAGI RFDHYRYKPT TSALKYESPN QKVEVLPKKQ
FSAVNFSLGL NYSITDSTLL SYEFSTGFKA PKIEEMYFDL KGEGSNHHLP NINLKPEKAQ
NHELSLTTEG DNYQLNLSVF YTKYRDFIDA DTKTEVIDNG YKKHVYSLSK VIYQQINIDK
AYVTGLDFHA RANGKIIGLS KSWYAILKAS YAKGRKNNGT AMLPIQPFST TLGLGYQAEN
DKWNVLFSGR YVSAKKAKDA IDIPVAYSLK LKADRGTGKV SGFEQPKPYR FLSSSYVVFD
LTAQYRLNSH FALNAGIFNL FNRKYTTWDT LRQIKYNGAL GDVYNNGKGL ERFTAAGRNF
ALSLEMKF
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