Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0567 |
Symbol | panF |
ID | 4240050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 603291 |
End bp | 604733 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638104116 |
Product | sodium/panthothenate symporter |
Protein accession | YP_718778 |
Protein GI | 113460712 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4145] Na+/panthothenate symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.868181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAC ATTACAAACA ATCAGCTAAA GAATCTCGCT ATGCCTTGTT CTTAACAGTG CTATATCTTA TCGGCTGGTG CATTTTTGCC TATTTACCTG ATGATGCAAG AGGTCCGCTT GGTTTTCCTC TTTGGTTTGA ATTGTCTTGC ATATACTTTC CCATAGTGTT TATTATCATC GTGTATTTGT GTATTAAGTT CTTTTTTAAG AATCTATCAT TAGGAGAGGA AAAATGA
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Protein sequence | MNINIILPLV LYLLFVFGIA YYSYRQRSQG NFLSEYYIGN RSMSGFVLAM TTAATYVGAG SFIGGPGAAY KFGLGWVLLA MIQVPVVLFT LGVLGKKLAM LARKNQSLTV NDILFSRYKN PYIILLASLS LLFSFFIMMS VQFIGIGRLL ETTLHIDYHI SVLIFATTVG IYTFIGGFRA VVLTDTIQGL IMVLGTFLLL GGVIYAGGGI SQLIDHLAKI DPHLITPYGT DDRPLDFTFM ASFWVLVCFG LLGLPHTVVR AIAYKNSKAL HSGIIIGTIV IAVLMLGIHL AGALGRAVIP TLDVSDKIIP TLMIQVLPPV VAGIFLAAPM AAIMSSVDST LIQMSSTLIK DLYLRFYPAQ IHNETGIKRL SILTTLFLTL LVTIATLNPP DMLIWLNLFA LGGLETTFLW VMLFGLYWKK ANAYGAISSM LVGLISYILL TALDIKLFNF HAIIPALLFG LIAFLLGNQV GNKLIKNEEK
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