Gene HS_0565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0565 
SymboldusB 
ID4240048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp601230 
End bp602213 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content37% 
IMG OID638104114 
ProducttRNA-dihydrouridine synthase B 
Protein accessionYP_718776 
Protein GI113460710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00737] putative TIM-barrel protein, nifR3 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000409979 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAATTG GTTCTTATCA ATTAAAAAGT AATGTACTTT TAGCTCCTAT GGCAGGCATA 
ACAGATCAGC CTTTTAGAAG GCTTTGTTCT TTTTATGGAG CAGGTTTGAC TTGCTCTGAA
ATGATGTCAG CCAATCCACA AGTTTGGCAT ACAGAAAAAT CAAGATTGCG TCTTGCCCAT
CATCAAGATG CGGGAATTAA CGCTGTGCAA ATTGCTGGTT CTGATCCGAT TGAGATGGCT
CAAGCCGCAC AAGTAAATGT AGAATATGGT GCACAGATTA TTGACATTAA TATGGGGTGC
CCAGCTAAAA AAGTGAACCG TAAATTAGCA GGATCTGCTC TTTTACAATA TCCTGACTTA
GTTAAAAAAA TTCTATATTC GGTAGTCAGA GCGGTAAATG TACCGGTAAC ATTGAAGATT
AGAACAGGCT GGAATCAAGA GCATCGTAAT TGTATCGACA TTGCAAAAAT TGCTGAACAA
GCAGGAATTC AAGCATTAAG CATACATGGA CGTACACGTG AATGTTTATT TAATGGAAAT
GCTGAATATG ACAGCATTAA AAAAGTTAAA GAACAAATTT CGATTCCTGT TATTGCTAAT
GGTGATATAA CAACCGCAAA ACAAGCACAA GAAGTTCTCA ATTATACGGG AACAGATGGA
ATAATGATTG GACGTGGGGC ATTAGGTAAA CCTTGGCTAT TTCAGTCAAT AGTAAGCTTA
ATCGAAACAG GTATCACTAT TCCAGAGCCA AGTTTAGATG AAAAGTGCAG CGTGATTTTG
CAACATATTC GTGATCTGCA TCAGTTTTAT GGTGAAGATA AAGGATATCG CATAGCTCGT
AAGCACGTAT CTTGGTATTT AGAGGGAATT CAACCTAATT CCGATTTTAG ACAGACTTTT
AATGCAATTA CGAATGCTAA AGCACAACTA ATTGCACTAG AAGATTTTTT TAATTTTATT
TTATTGGATA AAGAAACATG TTAG
 
Protein sequence
MQIGSYQLKS NVLLAPMAGI TDQPFRRLCS FYGAGLTCSE MMSANPQVWH TEKSRLRLAH 
HQDAGINAVQ IAGSDPIEMA QAAQVNVEYG AQIIDINMGC PAKKVNRKLA GSALLQYPDL
VKKILYSVVR AVNVPVTLKI RTGWNQEHRN CIDIAKIAEQ AGIQALSIHG RTRECLFNGN
AEYDSIKKVK EQISIPVIAN GDITTAKQAQ EVLNYTGTDG IMIGRGALGK PWLFQSIVSL
IETGITIPEP SLDEKCSVIL QHIRDLHQFY GEDKGYRIAR KHVSWYLEGI QPNSDFRQTF
NAITNAKAQL IALEDFFNFI LLDKETC