Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0508 |
Symbol | |
ID | 4239990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 548175 |
End bp | 548915 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638104056 |
Product | hypothetical protein |
Protein accession | YP_718719 |
Protein GI | 113460653 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGAC ATAGTAAGTG GGCCAATATT AAACATCGTA AAGCAGCACA AGATGCACAA CGTGGTAAAA TTTTTACTAA ATTAATTCGT GAATTAGTAA CAGCGGCAAA ATTAGGTGGC GGAGATGTTG GTGCTAACCC TCGTTTACGT GCCGCAGTAG ATAAAGCTTT ATCTAACAAT ATGACACGAG ATACTATCAA CCGTGCTATT GAGCGTGGTG TAGGCGGTGG TGATGGCACC AATATGGAAA CTAGAATTTA TGAGGGCTAT GGTCCGGGCG GGACTGCGGT GATGGTTGAG TGTCTCAGCG ATAATGCTAA CCGCACCATT TCTCAAGTAC GACCAAGTTT TACAAAGTGC GGTGGTAATT TGGGAACAGA AGGCTCAGTA GGGTATTTAT TTAGTAAAAA AGGGCTAATT TTAGTTGAGT CTGCTGACGA GGATGCCTTG ACAGAGGCAG CCATTGAAGC GGGTGCTGAT GATATTCAAG TACAAGAAGA CGGTAGTGTT GAAATTTACA CAGCATGGGA AGATTTAGGC TTAGTGAAAG ACGGTATTGA AGTAGTCGGA TTTAAAGTTG TTAATGCTGA AGTAACAATG ATACCTTCCA CAATGGTTGA TTTGGATGCA GAAACCGCAC CTAAATTGTT AAGACTGATC GATATGCTGG AAGATTGTGA TGATGTACAA AACGTTTATC ATAATGGCGA GATAAGTGAT GAGGTTGCTG CTTTACTTTA A
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Protein sequence | MAGHSKWANI KHRKAAQDAQ RGKIFTKLIR ELVTAAKLGG GDVGANPRLR AAVDKALSNN MTRDTINRAI ERGVGGGDGT NMETRIYEGY GPGGTAVMVE CLSDNANRTI SQVRPSFTKC GGNLGTEGSV GYLFSKKGLI LVESADEDAL TEAAIEAGAD DIQVQEDGSV EIYTAWEDLG LVKDGIEVVG FKVVNAEVTM IPSTMVDLDA ETAPKLLRLI DMLEDCDDVQ NVYHNGEISD EVAALL
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