Gene HS_0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0508 
Symbol 
ID4239990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp548175 
End bp548915 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content42% 
IMG OID638104056 
Producthypothetical protein 
Protein accessionYP_718719 
Protein GI113460653 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAC ATAGTAAGTG GGCCAATATT AAACATCGTA AAGCAGCACA AGATGCACAA 
CGTGGTAAAA TTTTTACTAA ATTAATTCGT GAATTAGTAA CAGCGGCAAA ATTAGGTGGC
GGAGATGTTG GTGCTAACCC TCGTTTACGT GCCGCAGTAG ATAAAGCTTT ATCTAACAAT
ATGACACGAG ATACTATCAA CCGTGCTATT GAGCGTGGTG TAGGCGGTGG TGATGGCACC
AATATGGAAA CTAGAATTTA TGAGGGCTAT GGTCCGGGCG GGACTGCGGT GATGGTTGAG
TGTCTCAGCG ATAATGCTAA CCGCACCATT TCTCAAGTAC GACCAAGTTT TACAAAGTGC
GGTGGTAATT TGGGAACAGA AGGCTCAGTA GGGTATTTAT TTAGTAAAAA AGGGCTAATT
TTAGTTGAGT CTGCTGACGA GGATGCCTTG ACAGAGGCAG CCATTGAAGC GGGTGCTGAT
GATATTCAAG TACAAGAAGA CGGTAGTGTT GAAATTTACA CAGCATGGGA AGATTTAGGC
TTAGTGAAAG ACGGTATTGA AGTAGTCGGA TTTAAAGTTG TTAATGCTGA AGTAACAATG
ATACCTTCCA CAATGGTTGA TTTGGATGCA GAAACCGCAC CTAAATTGTT AAGACTGATC
GATATGCTGG AAGATTGTGA TGATGTACAA AACGTTTATC ATAATGGCGA GATAAGTGAT
GAGGTTGCTG CTTTACTTTA A
 
Protein sequence
MAGHSKWANI KHRKAAQDAQ RGKIFTKLIR ELVTAAKLGG GDVGANPRLR AAVDKALSNN 
MTRDTINRAI ERGVGGGDGT NMETRIYEGY GPGGTAVMVE CLSDNANRTI SQVRPSFTKC
GGNLGTEGSV GYLFSKKGLI LVESADEDAL TEAAIEAGAD DIQVQEDGSV EIYTAWEDLG
LVKDGIEVVG FKVVNAEVTM IPSTMVDLDA ETAPKLLRLI DMLEDCDDVQ NVYHNGEISD
EVAALL