Gene HS_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0501 
Symbolrnt 
ID4239983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp543483 
End bp544139 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content38% 
IMG OID638104049 
Productribonuclease T 
Protein accessionYP_718712 
Protein GI113460646 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCAC TTTCAGAACA AGCAGTGGAT TATAATTTAC TTAAAAATCG CTTTCGGGGT 
TTTTTTCCTG TCATTATTGA TGTGGAGACA GCAGGCTTTA ATGCTCAAAC AGATGCCTTG
CTGGAGCTAG CTGCAATCAC ACTGAAAATG GATGAAAACG GTCTATTAGT ACCGGATGAA
AAATGCCATT TTCATATTCA ACCGTTCGAA GGGGCTAATA TTAATCCTGA ATCACTCAAA
TTTAATGGTA TTGATATAGA CAATCCGTTG CGTGGTGCTA TATCAGAAAA TGTTGCTATG
AGTGAATTGT TTAAAATGGT GCGTCATGGG CAAAAAAAGG CTGACTGTCA ACGTTCAGTT
ATCGTGGCTC ATAATGCGAC ATTTGATCAA AGTTTTGTTA TGGCAGCAGC AGAACGTACG
AAAATAAAAC GCAATCCGTT TCATCCTTTT TCGATATTTG ATACCGCAAC GTTAAGCGGT
TTTATGTTCG GACAAACAGT GTTGGTCAAA GGTTGTCAGG TTGCCAATAT TTCTTTTGAT
GGAAAAAAAG CACATTCTGC TTTATATGAT GCGGAACGAA CAGCTGAACT TTTTTGTTAT
ATGGTAAATC ATTTAAAAAA ACTGGGCGGT TTTCCCCATG TGGCAATAAA CTCATAA
 
Protein sequence
MTALSEQAVD YNLLKNRFRG FFPVIIDVET AGFNAQTDAL LELAAITLKM DENGLLVPDE 
KCHFHIQPFE GANINPESLK FNGIDIDNPL RGAISENVAM SELFKMVRHG QKKADCQRSV
IVAHNATFDQ SFVMAAAERT KIKRNPFHPF SIFDTATLSG FMFGQTVLVK GCQVANISFD
GKKAHSALYD AERTAELFCY MVNHLKKLGG FPHVAINS