Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0501 |
Symbol | rnt |
ID | 4239983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 543483 |
End bp | 544139 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104049 |
Product | ribonuclease T |
Protein accession | YP_718712 |
Protein GI | 113460646 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCAC TTTCAGAACA AGCAGTGGAT TATAATTTAC TTAAAAATCG CTTTCGGGGT TTTTTTCCTG TCATTATTGA TGTGGAGACA GCAGGCTTTA ATGCTCAAAC AGATGCCTTG CTGGAGCTAG CTGCAATCAC ACTGAAAATG GATGAAAACG GTCTATTAGT ACCGGATGAA AAATGCCATT TTCATATTCA ACCGTTCGAA GGGGCTAATA TTAATCCTGA ATCACTCAAA TTTAATGGTA TTGATATAGA CAATCCGTTG CGTGGTGCTA TATCAGAAAA TGTTGCTATG AGTGAATTGT TTAAAATGGT GCGTCATGGG CAAAAAAAGG CTGACTGTCA ACGTTCAGTT ATCGTGGCTC ATAATGCGAC ATTTGATCAA AGTTTTGTTA TGGCAGCAGC AGAACGTACG AAAATAAAAC GCAATCCGTT TCATCCTTTT TCGATATTTG ATACCGCAAC GTTAAGCGGT TTTATGTTCG GACAAACAGT GTTGGTCAAA GGTTGTCAGG TTGCCAATAT TTCTTTTGAT GGAAAAAAAG CACATTCTGC TTTATATGAT GCGGAACGAA CAGCTGAACT TTTTTGTTAT ATGGTAAATC ATTTAAAAAA ACTGGGCGGT TTTCCCCATG TGGCAATAAA CTCATAA
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Protein sequence | MTALSEQAVD YNLLKNRFRG FFPVIIDVET AGFNAQTDAL LELAAITLKM DENGLLVPDE KCHFHIQPFE GANINPESLK FNGIDIDNPL RGAISENVAM SELFKMVRHG QKKADCQRSV IVAHNATFDQ SFVMAAAERT KIKRNPFHPF SIFDTATLSG FMFGQTVLVK GCQVANISFD GKKAHSALYD AERTAELFCY MVNHLKKLGG FPHVAINS
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