Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0479 |
Symbol | glyS |
ID | 4239961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 518592 |
End bp | 520658 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638104027 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_718690 |
Protein GI | 113460624 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAC AAAACTTCCT CGCCGAGATC GGCACAGAAG AGTTGCCACC AAAGGCACTC AAAAAATTAG CGACCGCATT TGCGGAGAAT GTTGAGCAAG AGTTAAATCA AGCAGGGTTG GCTTTTGAGA AAGTGGAATG GTTTGCAGCC CCTCGCCGTT TGGCAGTAAA AGTGTTGGGG TTGGCAGAGG CTCAACCGAG CAAACAAGTT GAAAAACGTG GGCCGGCAGT ATCGGCGGCG TTTGATGCCG AAGGTAAGCC GACCAAAGCG GCGGAAGGCT GGGCGAGAGG CTGTGGCATT ACCGTTGAGC AAGCCGAACG TCTTTCCACC GATAAAGGCG AATGGCTGGT GCATCGTGCA GTGATTGAAG GTCAGCTGAC TAAAAACTTG CTTGTAGGCA TTATTGATAA AGCCCTTGCA GGATTACCAA TTCCAAAAAC AATGCGTTGG GGCGATAAAA CCGAGCAGTT TGTACGTCCG GTGCATACCG TAACGCTTTT ATTCGGTGCA GATCTGATTG AAGGGGAAAT TTTAGGCGTG GCGAGCGGGC GTACCGTTCG TGGACATCGT TTTTTAGGTG AGCGTGAATT TAGTCTTGAT CACGCCGATC AATATCCGCA ATTGCTCAAA GAACGTGGTT CTGTGGTAGC CGATTTCAAT GAACGTAAAG CGTTGATCCT TGCAACATCT CGAGAAAAAG CGACCGCACT TGGCGGTGTG GCGGATATTG AAGAAGAGTT GTTGGAAGAA GTAACGTCAT TAGTTGAATA TCCGAATGTA CTGACCGCTA AATTTGAAGA ACGTTTCCTT GCCGTCCCTG CGGAAGCCTT GGTTTATACG ATGAAAGGCG ACCAAAAATA CTTTCCGATT TATGATAAAG ACGGAAAATT ATTACCGCAC TTTATCTTCG TGTCCAATAT TAATCCGGAC GATCCGAGCA AAATTATTGA AGGCAACGAA AAAGTGGTTC GCCCACGCTT GACCGATGCG GAATTCTTCT TCAAAACAGA CTTAAAACAG AAATTGGAAG ATCGGTTGCC ACGCCTTGAA ACCGTGTTAT TCCAACAGCA GCTTGGCACA TTGCGTGATA AAACCGCTCG TATTGAAGCC TTAGCAGGCG AAATTGCAGC ACAAATCGGG GCGGATCAAA CGAAAGCGAA ACGTGCCGGC TTGCTCTCAA AATGCGATTT GATGACCAAT ATGGTGTTTG AATTTACCGA TACGCAAGGC GTAATGGGTA TGCACTATGC TCGCCACGAT GGCGAAGATG AAGACGTGGC GGTTGCGTTG AACGAACAAT ATATGCCACG TTTTGCCGGT GATACATTGC CGAATTCGTT AGTCGCTTGT TCTGTTGCAT TGGCGGATAA AATTGATACG CTCACAGGGA TTTTCGGTAT TGGACAATCC CCGAAAGGCA GTGCCGACCC GTTTGCTTTA CGTCGTGCCG CACTGGGTTG TCTGCGAATT ATTGTGGAGA AAAACTTGCC GTTGGATTTA GCTGACATTG TGGCAAAAGC GACCGCACTT TTTGGCGACA AACTGACGAA TAAAAATGTG GTTGATGAAG TAGTAGACTT TATGCTTGGC CGCTTCCGTG CATGGTATGA AAGTGAAGGC ATTGCAGTAG ACGTCATTCA ATCTGTATTG GCTCGCCGTC CGACCAAACC TGCGGACTTC GATGCTCGTG TGCGTGCGGT TTCTCATTTC CGTACATTAG ACAGTGCCGA AGCCTTAGCC GCCGCAAATA AACGTGTGAG TAACATTTTG GCGAAAGCCG ATATTGCGAT TGGTGAGATT GATTTAGGCG TTTGCGTAGA GTCGGCAGAA AAAACGTTGG CGGAAGCGGT TCTTGCCTTA AAAGGTGAAG TGCAACCGTT AATTGCACAA GGCGACTACA CGGCTGTATT GGATAAATTA GCGAATTTAC GTCAGCCGAT TGATGCGTTT TTTGACGGAG TAATGGTAAA TGTGGAAGAA CAAACGCTTC GCCAAAATCG CTTAGCGATT TTAAGCACTC TACAAAATCT CTTTTTACAA GTAGCAGACA TTTCGGTGTT GCAATAA
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Protein sequence | MTTQNFLAEI GTEELPPKAL KKLATAFAEN VEQELNQAGL AFEKVEWFAA PRRLAVKVLG LAEAQPSKQV EKRGPAVSAA FDAEGKPTKA AEGWARGCGI TVEQAERLST DKGEWLVHRA VIEGQLTKNL LVGIIDKALA GLPIPKTMRW GDKTEQFVRP VHTVTLLFGA DLIEGEILGV ASGRTVRGHR FLGEREFSLD HADQYPQLLK ERGSVVADFN ERKALILATS REKATALGGV ADIEEELLEE VTSLVEYPNV LTAKFEERFL AVPAEALVYT MKGDQKYFPI YDKDGKLLPH FIFVSNINPD DPSKIIEGNE KVVRPRLTDA EFFFKTDLKQ KLEDRLPRLE TVLFQQQLGT LRDKTARIEA LAGEIAAQIG ADQTKAKRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD GEDEDVAVAL NEQYMPRFAG DTLPNSLVAC SVALADKIDT LTGIFGIGQS PKGSADPFAL RRAALGCLRI IVEKNLPLDL ADIVAKATAL FGDKLTNKNV VDEVVDFMLG RFRAWYESEG IAVDVIQSVL ARRPTKPADF DARVRAVSHF RTLDSAEALA AANKRVSNIL AKADIAIGEI DLGVCVESAE KTLAEAVLAL KGEVQPLIAQ GDYTAVLDKL ANLRQPIDAF FDGVMVNVEE QTLRQNRLAI LSTLQNLFLQ VADISVLQ
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