Gene HS_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0470 
Symbol 
ID4239952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp501891 
End bp502535 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content34% 
IMG OID638104018 
Producthypothetical protein 
Protein accessionYP_718681 
Protein GI113460615 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGCTT TTTCGCTTTT TATTAGTGAA TTTCACTCGG GAATGTTACA ATCCGCTACC 
GTTATAACAA TAGAGATAAA TACAATGGCT CGTACAAAAA AAACTCGTCG AATAACAGAT 
ATTATGCCCA TGCGTAAAAC AGATAAACGT CCGGAAAATT TGTCACGTCC CGGTAAAAAA 
CTTACTCGTT ATGAACTTGA TGCTAAATCT CGTGAAGAAA AAAAGAAAAA AAAACGTAAA 
GGACTAACCG CCGGTTCACG TCATAGTGCA GTAGATACAA GTAAAACAAT CGTACTTAAT 
GAAAAAAAAG ATCCTCGTGT TGGGAGTCGT AAAAAAGTTC CTCTTATTGT TGAATTTGTG 
AATAAACCTG AAAAAGGTAT GTTTATTCCT TCAGGTGCTT TAGAGGAAAA AGCGAAAACT 
ATTGATCCGA TGCTGGAACT GACACAACTC GAAAATAATG AAAGTTTAAA TCAATTATTA 
GATGAGCTTG ATGCAGGTAA AACCTTAAGT AAAAAAGATC AAATCTTTGT CAATCAATGC 
CTAGACCGTA TTGCTCAACT TATGGCTGAA CTTGGAATTG AAGAAGAAAG TGAAGATGAT 
TTGTACCGCA CTTTTGAGAC TATTGATATT AACCAATTTA AATAA
 
Protein sequence
MTAFSLFISE FHSGMLQSAT VITIEINTMA RTKKTRRITD IMPMRKTDKR PENLSRPGKK 
LTRYELDAKS REEKKKKKRK GLTAGSRHSA VDTSKTIVLN EKKDPRVGSR KKVPLIVEFV 
NKPEKGMFIP SGALEEKAKT IDPMLELTQL ENNESLNQLL DELDAGKTLS KKDQIFVNQC 
LDRIAQLMAE LGIEEESEDD LYRTFETIDI NQFK