| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0461 |
|---|
| Symbol | |
|---|
| ID | 4239943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 491711 |
|---|
| End bp | 493087 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638104009 |
|---|
| Product | D-alanine glycine permease |
|---|
| Protein accession | YP_718672 |
|---|
| Protein GI | 113460606 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0104177 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAG AGATAATTTT ATCGTCTATC AATACTTTTG TTTGGGGACC TCCCTTACTT
CTTCTTTTAT TTGGTACAGG TCTTTACTTA ACCTTACGCT TAGGATTTAT TCAAATTCGT
TACTTACCTC GTGCATTATA TTATTTATTT GATAAAGAAC GTCATGTAAG TAAAAAAGGG
GATATTTCTG CTTTCGCAGC CCTTTGTACG GCTTTAGCGG CAACAATAGG TACGGGAAAT
ATTGTTGGTG TTGCAACTGC TTTGCAAGCC GGTGGGCCAG GGGCTATTTT TTGGATGTGG
TTAGTTGCTT TACTTGGAAT GGCAACTAAA TATGCTGAGT GTTTATTAGC GGTGAAATAT
CGGGTGCGAG ATAAACAAGG TTTTATGAGT GGCGGACCAA TGTACTATAT TGAGAAAGGC
TTAGGAATAA AATGGCTTGC CAAATTTTTT GCCGTCTGTG GTGTATTAGT TGCATTTTTG
GGCATTGGCA CTTTTCCTCA AATTAATGCA ATCACGCATG CTATGCAAGA TACCTTTAAC
GTATCTATTG AAATTACAGC AACCATTATT ACCGCACTTA TTGCACTTAT TATCTTAGGC
GGTGTTAAAC GCATTTCAAC AGTTGCATCT ATTATTGTTC CTTTTATGGC TGTTTTATAT
GTACTTACGT CTTTGTTAAT TCTTATATTA AATTGGCAAC AAGTACCAAC CGCTATTGGA
CTAATTATTT ACAGTGCATT TAATCCTCAA GCAGCATTAG GCGGTGTATT TGGATATACT
GTTCTGAAAG CTATTCAATC AGGATTTGCA AGGGGTATTT TCTCTAATGA ATCCGGATTA
GGTAGTGCAC CAATTGCGGC GGCAGCAGCT CAAACTAAAG AACCTGTTCG TCAAGGATTA
ATTTCGATGA TAGGTACTTT TTTAGATACT ATCGTTGTGT GTACTATGAC AGGTATCGTG
CTTGTTTTAA CAGGTGCTTG GCAATCACAA GAATTGGCTG GTGCCGCTTT AACTAACTAT
GCATTTTCAC AAGGGTTAGG AAATAATATC GGTGCAACAA TTGTAACTGT AGGGTTACTG
TTTTTTGCTT TTACCACTAT TTTAGGTTGG TGTTATTACG GAGAACGTTG TTTTGTTTAT
CTGGCAGGTG TCAAAGGTAT CAAAGTTTAT CGTTCAATTT TTATACTTTT AGTTGCCTGT
GGTGCTTTTA TTAAACTGGA ATTAATTTGG ATTTTGGCTG ATATTGTGAA TGGTTTAATG
GCATTTCCAA ATTTAATTGC TTTAGTTGGA TTGCGACATA TTGTGATCAA TGAAACTAAA
GATTATTTTA TTCGCAGGAA ACAAATATTT GTTGAGCCAA ATAATGTTGC TAATTGA
|
|---|
| Protein sequence | MSLEIILSSI NTFVWGPPLL LLLFGTGLYL TLRLGFIQIR YLPRALYYLF DKERHVSKKG
DISAFAALCT ALAATIGTGN IVGVATALQA GGPGAIFWMW LVALLGMATK YAECLLAVKY
RVRDKQGFMS GGPMYYIEKG LGIKWLAKFF AVCGVLVAFL GIGTFPQINA ITHAMQDTFN
VSIEITATII TALIALIILG GVKRISTVAS IIVPFMAVLY VLTSLLILIL NWQQVPTAIG
LIIYSAFNPQ AALGGVFGYT VLKAIQSGFA RGIFSNESGL GSAPIAAAAA QTKEPVRQGL
ISMIGTFLDT IVVCTMTGIV LVLTGAWQSQ ELAGAALTNY AFSQGLGNNI GATIVTVGLL
FFAFTTILGW CYYGERCFVY LAGVKGIKVY RSIFILLVAC GAFIKLELIW ILADIVNGLM
AFPNLIALVG LRHIVINETK DYFIRRKQIF VEPNNVAN
|
|---|
| |