Gene HS_0448 details

Gene Information

• Locus tag: HS_0448
• Symbol: tbpB
• ID: 4239925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 473089
• End bp: 475053
• Gene Length: 1965 bp
• Protein Length: 654 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638103991
• Product: transferrin-binding protein
• Protein accession: YP_718658
• Protein GI: 113460593

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000287066
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTCTT TCAAATTATT AGGCTTTTCG GTCTTGAGTG TGGCTTTGCT CTCTGCCTGC 
TCTTCCGGCA AAGGTGGCTT TGATTTAGAC GACGTCGAGC ATACCCCCCC CTCCTCCTCG 
GGTAGTTCCC GCCCCACTTA TCAAGATGTT CCGACTGGAC AACGGCAGCA AGAAATAGTA 
GAAGAAATCA ACTCACCTGC TCTAGGTTAT GCGACAGAAA TTCCGCGTAG GAATATTTCG 
CCAATGCCCA CCACGGGCAC AAAAGAAAGT AATGCTCGTG TTGCCATTAC TGCCCAGCAA 
GTTGCCCCCC TTAGCATGCC TTTTAATTCA ATAAAAGAAG ATTTTATCAA AAGGCTAATA 
GCAGAAAACA CCAAGAAAAA TGCACGAGGT AGAGATGTAA AATATTTTGA TGATACAGAT 
GACGTGTTGT TTGCACATGA TGGATCTAAT TTAGCGCATA AACGTGATTT ACAATATGTT 
CGAGTTGGGT ATGTGTTGGG TACCCGAAAG ATTGAACTTG TTTTTTCCCA TGATAAAAAA 
ACAAGAGATC AATTTCCTGC TGGTTGGGTA GGTTATGTTT TTTACCAAGG CACTAGCCCT 
GCGGTTACAT TACCTACACA AACCGTAACA TACAAAGGCT ATTGGGATTT TGTTAGTGAT 
GCCTTCAATG AACGAACTTT AGCTGAAGAT TTTACACAGG AAAATAGTTC TGCTACTAGC 
AATATACCGG GCAATCAAAT CGGTGCGACT TCAATGGATG CATTGGTTAA TCGCAAAGTT 
TCAGGAGAAA AAATCAATAT TGCTCACAGT GCTGAGTTTA CTGCTGATTT TGGCAGTAAA 
AAACTTTCAG GTGAATTAAA AAGTAACGGT TATGTTTCTA GAAAAGAAAA TGATCAAGAT 
GTAAAAACAC GCTATAAAAT TAATGCTGAT ATCAAAGGCA ACCGTTTTGT CGGTTCGGCA 
ACGTCAACAG CGAATGGACA CACCATCTTC GGCAAGGATG CGGACAAACG TCTCGAGGGA 
GGGTTCTTTG GTCCCAAAGC CGAGGAACTG GCAGGGAAAT TCCTGACCAA TGATAATTCC 
CTGTTTGTTG TCTTTGGTGC AAAACGTGAA AGTAAAGGCG ATGAAAAACT AGAAACCCGC 
TTTGATGCCG TTAAAATCAG CACGGATAGT AATAAATTAG AAAAAGAAAC GATGGATACG 
TTCGGCAATG CCAGCTATTT AGTGTTGGAC GGCAGACAGT TTCCTTTGGT GCCGGAAAGT 
AATGCCGGTA CGACGGGCGC TGGCAACACA GGCAAGAATG ATTTCATCAC CACCATAGAC 
GGTAACCAAT TAAGCAAAAC AAACCATGAT AAGCACAAAA ACTACAAAGT TACCGTATGC 
TGCAGTAATT TGCAATATGT GAAATTCGGC AGCTATGGGG AACAAACAAC AGCAACTACG 
CATAACGGCA CATCAACTAG CCAATTAACA AACGGACACC TTTTCCTAAC CGGTGAACGC 
ACTTCGCTTG CCGATATGGA GAAGGAAAAA GGCACAGCAA ACTACCGTGG CACTTGGCAG 
GCTAATTTTT CAAGTAATGA CGGCAGAGTA AGTACTGTTG AACCAGGCGA TTCTCGCAAC 
GGCAATAATG CTAAAAGCCG TGCTGAATTT GATGTTGACT TTGGCGGTAA GACAGTTGCA 
GGCAAGTTTT TTGATGCCGA CGGTATTCAA CCAGCCCTCA CAATGGATAG TACCATGATT 
ACAGGTAACG GGTTCTCCGG CATGGCTAAA ACCCAAATTG ATGGCTTTCA GTTAGATAAA 
GGCAGTACAA CTGGTGGTAC CAAAGTAAGC TTCACCGATG CTAAAGTCGA GGGCGCATTC 
TACGGTCCGA ACGCTGAAGA AATCGGCGGT ACCATCACAT CGAATGGCGC AGGCGATAAA 
GTCGGCGGGG TGTTCGGCGC GAAACGCCAA GAACCATCGA AATAG 

 

Protein sequence

MTSFKLLGFS VLSVALLSAC SSGKGGFDLD DVEHTPPSSS GSSRPTYQDV PTGQRQQEIV 
EEINSPALGY ATEIPRRNIS PMPTTGTKES NARVAITAQQ VAPLSMPFNS IKEDFIKRLI 
AENTKKNARG RDVKYFDDTD DVLFAHDGSN LAHKRDLQYV RVGYVLGTRK IELVFSHDKK 
TRDQFPAGWV GYVFYQGTSP AVTLPTQTVT YKGYWDFVSD AFNERTLAED FTQENSSATS 
NIPGNQIGAT SMDALVNRKV SGEKINIAHS AEFTADFGSK KLSGELKSNG YVSRKENDQD 
VKTRYKINAD IKGNRFVGSA TSTANGHTIF GKDADKRLEG GFFGPKAEEL AGKFLTNDNS 
LFVVFGAKRE SKGDEKLETR FDAVKISTDS NKLEKETMDT FGNASYLVLD GRQFPLVPES 
NAGTTGAGNT GKNDFITTID GNQLSKTNHD KHKNYKVTVC CSNLQYVKFG SYGEQTTATT 
HNGTSTSQLT NGHLFLTGER TSLADMEKEK GTANYRGTWQ ANFSSNDGRV STVEPGDSRN 
GNNAKSRAEF DVDFGGKTVA GKFFDADGIQ PALTMDSTMI TGNGFSGMAK TQIDGFQLDK 
GSTTGGTKVS FTDAKVEGAF YGPNAEEIGG TITSNGAGDK VGGVFGAKRQ EPSK