Gene HS_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0435 
SymbolalfA 
ID4239911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp463494 
End bp464132 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID638103977 
Productalpha-L-fucosidase 
Protein accessionYP_718644 
Protein GI113460580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3669] Alpha-L-fucosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGCTGA CCACCAAACA TCATGACGGT TTCTGCTTAT ATCCAAGTAA ATATACCGAT 
TTCAACTGCA CCCAAGCCGG CCCGCAACGT GATTTGATGG GGGAATTGAC CGACAACGTG 
CGTGAAAAAG GGCTGAAAAT GGGGGCTTAC TATTCAGGCA TTATAGACTG GACCTACTCT 
TCTGCACCGA TTTTCACCGA GAGTCAAAAC TTTTCCAATG CTTGCCCAAC CTATGAATAC 
GCCGATTACG CTTATAAACA AGTGGTTGAG CTGATTGATA AATATAAACC TGATGTACTT 
TGGAATGACA TCGGCTGGCC GAAAGCCGGT GAACATATGC TTCCGCACTT GTTTGCTCAC 
TACTATAACA ATGTACCACA CGGTGTGGTT GATGACCGTT GGAACAAGCT TTGGTGCGAT 
TTCACCTCAA AAGAGTACAA ACACGGCGTG GCTTCGCGTG ATAAAAAATG GGAAATGTGC 
CGTGGTATGG GCTTATCATT TGGTTACAAC AAAGTGGAAG ATGAAAGCCA CTTGATTTCA 
GTGAAAGATC TGATTTCGCT CTTAGTAGAA ACCGTGGCAG ACAACGGTAA CCTGTTGCTC 
AACATCGGCC CAAAAGCAGA CGGTACGATT CCACAATAG
 
Protein sequence
MVLTTKHHDG FCLYPSKYTD FNCTQAGPQR DLMGELTDNV REKGLKMGAY YSGIIDWTYS 
SAPIFTESQN FSNACPTYEY ADYAYKQVVE LIDKYKPDVL WNDIGWPKAG EHMLPHLFAH 
YYNNVPHGVV DDRWNKLWCD FTSKEYKHGV ASRDKKWEMC RGMGLSFGYN KVEDESHLIS 
VKDLISLLVE TVADNGNLLL NIGPKADGTI PQ