Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0424 |
Symbol | |
ID | 4239900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 452512 |
End bp | 453636 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638103967 |
Product | phage integrase |
Protein accession | YP_718634 |
Protein GI | 113460570 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.743387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGCAT ATAGAGATGA AAACAAAAAT GGTACTTGGT ATTGTAAGCT CAGCTATGTT AATTGGAAAG GGCAAAAGTT AAGTAAGAAA AAACGTGGTT TTTCAACTAA GAAAGAAGCT GTTGCTTGGG AAAAAGAGTT TTTAAACGGA CAAGCAGGAA GCATAGAATT AACATTTAGA GAGTTCTTTG AATTATATAA AAGGGATAAA AAACCACGCA TTAGAGAAAA TACATGGAGA ACAAAAGAAG CTATCGTTAA TTCAAAAATC ATGCCATATA TTGGGGACTT GCTGATGATT GATATTACTA ATGTAACAAT TATTCAGTGG CAAAACGAAC TGATGAAAGT CAAAGATGAT AGAGGTAGAA ATTATTCTCC TACTTATCTT CGTTCAATAC ATGCACAGTT AAGTAGCATC TTAAATCATG CTTGTAGATA CTATAATCTT AAAACTAATG TTGCCAGAGA TGTAGGAACA ATGGGAGAAA AAGAAGCTGA TGAAATGTCA TTTTGGACAC AGGAAGAATA TGAAAAGTTT ATAGCTGCGA TTAAAGACAA ACCTCAATCA TTCTATGCTT TTGAAATTTT ATATTGGTGT GGACTTAGAA TGGGAGAGCT ATTGGCACTT ACAAAAGAAA AATTTAACTT CAATACCAAC ACTCTAAAAG TAGACGAATC ACTTCAAAAA ATTGATGGTG AAAATATAAT TACTCCACCT AAAACAAAGA AGAGTATTAG AAAGATAGTA ATGCCTGATT TCTTGGCTGA GGAAATTCAG AATTACTTAG ATGGCTTTTA TAAGTTGAAA CCAAAAGATT TGATATTTAC TTTTTCGAAA AGCTATCTAC ATCATGAAAT GGATAGAGGA GCGAAGAAAG CTAATGTTAA AAGAATTAGA GTTCATGATC TAAGGCATTC GCATGTATCG TTACTAATTG AGCTTGGATT TTCTGCAACT GCAATTGCAG ATAGAGTAGG GCATGAATCA ATAGATATTA CCTATAGGTA TGCTCATTTA TTTCCAAGCA AGCAAAATGA AATGGCAGAT ACACTATCAC AAATGAGAAG TTCAAAGCAA AATGATTGGG ATAGTTTGCT CAAGGAGGAT AAAAATGATA TTTAG
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Protein sequence | MGAYRDENKN GTWYCKLSYV NWKGQKLSKK KRGFSTKKEA VAWEKEFLNG QAGSIELTFR EFFELYKRDK KPRIRENTWR TKEAIVNSKI MPYIGDLLMI DITNVTIIQW QNELMKVKDD RGRNYSPTYL RSIHAQLSSI LNHACRYYNL KTNVARDVGT MGEKEADEMS FWTQEEYEKF IAAIKDKPQS FYAFEILYWC GLRMGELLAL TKEKFNFNTN TLKVDESLQK IDGENIITPP KTKKSIRKIV MPDFLAEEIQ NYLDGFYKLK PKDLIFTFSK SYLHHEMDRG AKKANVKRIR VHDLRHSHVS LLIELGFSAT AIADRVGHES IDITYRYAHL FPSKQNEMAD TLSQMRSSKQ NDWDSLLKED KNDI
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