| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0380 |
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| Symbol | |
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| ID | 4239856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 390391 |
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| End bp | 391419 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638103923 |
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| Product | periplasmic-binding protein |
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| Protein accession | YP_718590 |
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| Protein GI | 113460526 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000526249 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TGAAAGTCGT ATTGACCAGT GCAACAGTTC TACTTGCTAC ATTGCTTGCC
GCTTGTGGTG ATAATAACAA AGCGTCGAAA GATGTTACTG CGAGCAACGT TGCGGCAAAC
AGCAGCAGTG CTGAAAGTGC GGTACCAGCC ACAGTGCAAA GCAAATTTGT GACCATTGCT
ACTGGCGGTG CTTCCGGTCC TTACAATATT ATTGCGACGA CACTGACAGG TATTTATAGT
AAAAATCTAA AAACTAATTC CAAAACACAA ACTACTGGTG CATCGGTAGA AAATTTAAAC
TTGATGGCAC AGAAAAAAGT GGAAATGGCG TTTGTGATGA GTGATGCGTT AAATGATGCG
TTAAATGGTA CAGGCAGTTT CAAAAATAAA ATTGAGAATG TGGAACAAAT AGCAGCACTT
TATCCTAACT ATGTACAAAT TGTCACCTCT AAACGTTCCG GCATTAAAAC CATTACCGAT
TTAAAAGGGA AACGGGTAGC GACCGGCGAT CAAAATTCCG GAGTCGAAGT CAATGCACGT
AACTTACTTG CCGGTTTTGG CATTTCCTAT GCGGATATTA AGGTTGATTA TCTCGGTTAT
GCTGCAGCGG CAGATGCTCT AAAAGCGGGA ACCATTGATG CGGCGTTCTT AACCAGTGGC
TTGCCAAATT CTGCCTTAAT GGAATTGCAA CAAAGTTTTG ATCTGCAATT GGTCTCTATC
CCGGCTGACG GAATTAAAAA ATTAGCCGCA GATAAACCGT ATTTTAATGC GATGGATATT
CCAGCGAACA CCTATGGCAA TCCTGAACCG ATTCCGACAG CGGCAATTAA AAATGCCTTG
GTGATCCGTA AAGAGCTCAG CGAAGCAGAT GGGTATTTAT TAACCAAAAC CTTCTTTGAA
AGTTTGCCAC AATTGCAAAC CGCACACCAA GCGGCGAAAG GCATTAATGT GAAAGAAGCA
CAGGAAGGTG CAGTTGCACC ATTACATCCG GGTGCAAAAA AATATTATGA CGAAGTTAAT
GCGAAATAA
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| Protein sequence | MKKMKVVLTS ATVLLATLLA ACGDNNKASK DVTASNVAAN SSSAESAVPA TVQSKFVTIA
TGGASGPYNI IATTLTGIYS KNLKTNSKTQ TTGASVENLN LMAQKKVEMA FVMSDALNDA
LNGTGSFKNK IENVEQIAAL YPNYVQIVTS KRSGIKTITD LKGKRVATGD QNSGVEVNAR
NLLAGFGISY ADIKVDYLGY AAAADALKAG TIDAAFLTSG LPNSALMELQ QSFDLQLVSI
PADGIKKLAA DKPYFNAMDI PANTYGNPEP IPTAAIKNAL VIRKELSEAD GYLLTKTFFE
SLPQLQTAHQ AAKGINVKEA QEGAVAPLHP GAKKYYDEVN AK
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