| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_0367 |
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| Symbol | rluD |
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| ID | 4239843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 375371 |
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| End bp | 376336 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638103910 |
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| Product | 23S rRNA pseudouridine synthase D |
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| Protein accession | YP_718577 |
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| Protein GI | 113460513 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATATTGT CAGCCGATAT TCAGCCCCAA CATATGGGAC AACGCTTAGA CCAAACGTTA
GCAGAATTGT TCCCGGATTA TTCCCGCTCT CGTTTGAAAA CATGGATTGA GGGTGATTTA
GTTAAAGTTA ATGGCGAAAT TATTAATGTT GCTCGTACAA AAGTTTACGG TGGTGAGTTA
GTGGAACTTT GTGTGGAAAT TGAAGAAGAA AGCAGGTTTG AACCTGAAAA TTTACCACTC
AATATTGTTT ATGAGGATGA GCATATTTTA GTTATTAATA AACCAAAAGA TTTTGTTGTC
CATCCCGGTG CAGGGAATCA AAGAGGAACT GTATTAAATG CACTGTTGTA TCATTATCCA
AAAATAGTAG AAGTGCCAAG AGCGGGCATA GTTCATCGTT TGGATAAAGA TACGACGGGG
TTAATGGTTG TTGCAAAGAC AATTCCGGCA CAAACAAAAT TGGTACAGGA TTTACAAAAA
CGTAAAATTA TACGTGAATA CGAAGCAGTT GCTTTTGGTG TGATGACACA AGGTGGAAAA
GTAGATCAAC CCATGTCCAG ACATCCGACA AAACGTACCC AAATGGCGGT TCATCCGTTG
GGAAAACCGG CAGTAACTCA TTATCGTATA ATGGAACGTT TCCGCAATTA TACTCGCTTA
CGCCTTCGTT TGGAAACAGG ACGCACTCAT CAAATTCGAG TGCATATGGC ACATATTTCC
CATCCTTTAC TAGGCGATCA AACTTATGGA GGTCGTCCTC GTCCACCGAA AAATGCAAGT
GAAGAATTTA TGCAAGTGAT GCGTGATTTT AAACGTCAAG CGTTGCATGC AATTATGCTC
CGCTTAACTC ATCCCATTAC AGGCGAAATA ATGGAATGGG AGGCTCCTTT GCCTGATGAC
TTTGTAACAT TAATCAATGC CTTAAAAGCA GATTATCAAT TACATAAAGA TGAATTAGAT
TATTAG
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| Protein sequence | MILSADIQPQ HMGQRLDQTL AELFPDYSRS RLKTWIEGDL VKVNGEIINV ARTKVYGGEL
VELCVEIEEE SRFEPENLPL NIVYEDEHIL VINKPKDFVV HPGAGNQRGT VLNALLYHYP
KIVEVPRAGI VHRLDKDTTG LMVVAKTIPA QTKLVQDLQK RKIIREYEAV AFGVMTQGGK
VDQPMSRHPT KRTQMAVHPL GKPAVTHYRI MERFRNYTRL RLRLETGRTH QIRVHMAHIS
HPLLGDQTYG GRPRPPKNAS EEFMQVMRDF KRQALHAIML RLTHPITGEI MEWEAPLPDD
FVTLINALKA DYQLHKDELD Y
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