Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0366 |
Symbol | comL |
ID | 4239842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 374473 |
End bp | 375261 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638103909 |
Product | DNA uptake lipoprotein |
Protein accession | YP_718576 |
Protein GI | 113460512 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.507354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAAAT TGAAATCTCT CGCTTTAGTC GCTTTTGCAA GCCTTGCTCT TGGTGCGTGT TCAAGCTCAG GTAAAGCTAT TGAAGAAGGA ACAGCACAAA CTCTTTATGA AAAAGGACAC AGCTATCTAC AAGACGCAGA TTATAGCCAA GCAATTCGTT ATTTAGACAC GGCAAAAAAA CGCTTCCCCG GAAGCCAATA TAATGAACAA GTACAATTGG ATCTAATTTA TGCTTACTAT AAATCTCAAG ACTACACTAA TGCTTTAGTA ACAATTGATC GCTTTATTCA ACAATACCCG CAAAGCTCGC ATTTAGATTA TGTCATTTAT ATAGCAGGTT TAAGCAATTC AGCATTAGGT GATAACTGGT TCCAAGACCT TTTTGGTGTA GATCGTGCGA CACGTGAAAG TACGTCTATC AAAACTGCAT TTGCTAACTT CCAAACGTTA GTTCAGCATT TCCCTAATAG CCCTTATGCG GCGGATGCTT TAGCACGTAT GGCTTATATT AGAGCAAGCC TCGCTCGTCA TGAATTGGAA ATTGCTAAAT TCTATGCAAA ACGCAATGCT CATGTTGCTG TAGCAAATCG TGTAGTGGGT ATGTTACAAC AATATCCTGA CACGAAAGCT ACTCTTGATG CGTTGCCATT GATGAAAAAT GCTTACGAAA AAATGGGGCT AACAAAATTG GCCCAACAAG CAGACAGCCT TATTCAAGCG AATCAAAATA AATCTTTTGA AAATGTAGCG AAACCTCAAG AACCTGAATT GCTTGCACCG AAAAAATAA
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Protein sequence | MHKLKSLALV AFASLALGAC SSSGKAIEEG TAQTLYEKGH SYLQDADYSQ AIRYLDTAKK RFPGSQYNEQ VQLDLIYAYY KSQDYTNALV TIDRFIQQYP QSSHLDYVIY IAGLSNSALG DNWFQDLFGV DRATRESTSI KTAFANFQTL VQHFPNSPYA ADALARMAYI RASLARHELE IAKFYAKRNA HVAVANRVVG MLQQYPDTKA TLDALPLMKN AYEKMGLTKL AQQADSLIQA NQNKSFENVA KPQEPELLAP KK
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