Gene HS_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0366 
SymbolcomL 
ID4239842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp374473 
End bp375261 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content39% 
IMG OID638103909 
ProductDNA uptake lipoprotein 
Protein accessionYP_718576 
Protein GI113460512 
COG category[R] General function prediction only 
COG ID[COG4105] DNA uptake lipoprotein 
TIGRFAM ID[TIGR03302] outer membrane assembly lipoprotein YfiO 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.507354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAT TGAAATCTCT CGCTTTAGTC GCTTTTGCAA GCCTTGCTCT TGGTGCGTGT 
TCAAGCTCAG GTAAAGCTAT TGAAGAAGGA ACAGCACAAA CTCTTTATGA AAAAGGACAC
AGCTATCTAC AAGACGCAGA TTATAGCCAA GCAATTCGTT ATTTAGACAC GGCAAAAAAA
CGCTTCCCCG GAAGCCAATA TAATGAACAA GTACAATTGG ATCTAATTTA TGCTTACTAT
AAATCTCAAG ACTACACTAA TGCTTTAGTA ACAATTGATC GCTTTATTCA ACAATACCCG
CAAAGCTCGC ATTTAGATTA TGTCATTTAT ATAGCAGGTT TAAGCAATTC AGCATTAGGT
GATAACTGGT TCCAAGACCT TTTTGGTGTA GATCGTGCGA CACGTGAAAG TACGTCTATC
AAAACTGCAT TTGCTAACTT CCAAACGTTA GTTCAGCATT TCCCTAATAG CCCTTATGCG
GCGGATGCTT TAGCACGTAT GGCTTATATT AGAGCAAGCC TCGCTCGTCA TGAATTGGAA
ATTGCTAAAT TCTATGCAAA ACGCAATGCT CATGTTGCTG TAGCAAATCG TGTAGTGGGT
ATGTTACAAC AATATCCTGA CACGAAAGCT ACTCTTGATG CGTTGCCATT GATGAAAAAT
GCTTACGAAA AAATGGGGCT AACAAAATTG GCCCAACAAG CAGACAGCCT TATTCAAGCG
AATCAAAATA AATCTTTTGA AAATGTAGCG AAACCTCAAG AACCTGAATT GCTTGCACCG
AAAAAATAA
 
Protein sequence
MHKLKSLALV AFASLALGAC SSSGKAIEEG TAQTLYEKGH SYLQDADYSQ AIRYLDTAKK 
RFPGSQYNEQ VQLDLIYAYY KSQDYTNALV TIDRFIQQYP QSSHLDYVIY IAGLSNSALG
DNWFQDLFGV DRATRESTSI KTAFANFQTL VQHFPNSPYA ADALARMAYI RASLARHELE
IAKFYAKRNA HVAVANRVVG MLQQYPDTKA TLDALPLMKN AYEKMGLTKL AQQADSLIQA
NQNKSFENVA KPQEPELLAP KK